Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone4ag1015 | ATGGAAACCTTCCTTCTTCTAATTACCTTGGCCACTGCCACATCAGCATATCTGTTCTGGTTCTACCTTCTTGCCCGGAAGCTCTCCGGTCCGAAAGTATGGCCAATTGTCGGAAGCCTTCCATTTCTCTTCGCCAACAGGAACAGATTCCACGACTGGGTTGCGAGTCACCTCCGTGCAACAGGCGGCTCGTGCACTTACCAGACTTGCACCATTGCCATTCCTTTCTTGGCTCGGAAACAAGGATTTTACACAGTCACATGCCATCCGAAAAATGTCGAGCACATTCTCCGAACCCGGTTCAATAACTACCCCAAGGGACCCACATGGCAGGCAGCTTTCCACGATCTTCTAGGACAAGGGATCTTTAACAGTGACGGAGAAACATGGCTCGTGCAAAGGAAAACAGCTGCATTAGAGTTCACGACCAGGACGCTTAGGCAAGCCATGGCTCGGTGGGTGAGCCGAACCATAAGGACTAGACTTTGGTGCATTTTGGACAAGGCGGCTTACTATAACACCTCTGTCGATCTGCAGGACTTGTTGCTCCGCTTAACGTTTGATAATATTTGTGGCCTTACGTTCGGCAAAGATCCGGAAACTCTCTCTCCCGATTTACCAGAAAATCGGTTTGCCGTTGCGTTTGATACAGCCACTCAAGCGACCCTGCAACGCCTTCTTTATCCAGGCTTCTTATGGAGGTTGGAGAAAACTTTCAGCATTGGGTCCGAAAAGAGGTTAAAGAAAAGCCTTGACATAGTAGAAAATTACATGAATGAGACCATCGCCAAAAAACAATCTCCTTCTGATGATTTATTGTCTCGTTTCATGAAGAAGCGCGATGTAAACGGCGACCCATTTCCAACAAATGTACTACAAGGCATCGCCTTAAACTTCGTCCTAGCTGGACGCGACACGTCATCCGTGGCTCTTACCTGGTTCTTCTGGAACATCATGAACCATCCTCACGTCGAGGAGAAGATCGTCAAGGAGATATCGACAGTCCTAAATGAGACACGTGGCAATGATAAACGGAAGTGGATCGAGGAGCCATTGGATTTCGATGAGGCCGACAAGCTAATGTACCTCAAAGCGGCTTTGGCAGAGACTTTGCGTCTGTATCCATCTGTGCCTGAAGACTTCAAGTATGTGGTAAACGACGATATTTTACCGGACGGCACGTTTTTGCCGGCCGGTTCTACGGTTACTTATTCAATCTATTCTGCGGGAAGGATGAAGAGTATATGGGGGGAGGATTGCATGGAGTTCAAACCGGAACGTTGGGTATCAGTTGATGGAACCCGGTTCGAACCGCCAAAAGATGGTTATCGGTTTATAGCGTTTAATGCTGGACCGAGAACGTGTTTAGGGAAGGAGTTGGCTTATTTGCAGATGAAGTCGGTGGCTGCGGCTGTGATTTTGCGTTACAGGTTGTGTCTAGTTCCGGGTCACAGGGTGGAGCAGAAGATGTCTCTTACGCTTTTCATGAAGAATGGGCTGAGGGTGTACCTGAATCCGCGTAGTCTCTAG | 1530 | 48.43 | METFLLLITLATATSAYLFWFYLLARKLSGPKVWPIVGSLPFLFANRNRFHDWVASHLRATGGSCTYQTCTIAIPFLARKQGFYTVTCHPKNVEHILRTRFNNYPKGPTWQAAFHDLLGQGIFNSDGETWLVQRKTAALEFTTRTLRQAMARWVSRTIRTRLWCILDKAAYYNTSVDLQDLLLRLTFDNICGLTFGKDPETLSPDLPENRFAVAFDTATQATLQRLLYPGFLWRLEKTFSIGSEKRLKKSLDIVENYMNETIAKKQSPSDDLLSRFMKKRDVNGDPFPTNVLQGIALNFVLAGRDTSSVALTWFFWNIMNHPHVEEKIVKEISTVLNETRGNDKRKWIEEPLDFDEADKLMYLKAALAETLRLYPSVPEDFKYVVNDDILPDGTFLPAGSTVTYSIYSAGRMKSIWGEDCMEFKPERWVSVDGTRFEPPKDGYRFIAFNAGPRTCLGKELAYLQMKSVAAAVILRYRLCLVPGHRVEQKMSLTLFMKNGLRVYLNPRSL | 509 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 8861130 | 8862659 | + | Conep04aG0105000.1 | Cone4ag1015 | 435993 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone4ag1015 | 509 | CDD | CYP86A | 70 | 500 | - | - | |
| Cone4ag1015 | 509 | PANTHER | CYTOCHROME P450 | 18 | 500 | - | - | |
| Cone4ag1015 | 509 | SUPERFAMILY | Cytochrome P450 | 20 | 507 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1015 | 509 | PRINTS | E-class P450 group I signature | 291 | 308 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1015 | 509 | PRINTS | E-class P450 group I signature | 364 | 382 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1015 | 509 | PRINTS | E-class P450 group I signature | 311 | 337 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1015 | 509 | PRINTS | E-class P450 group I signature | 455 | 478 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1015 | 509 | PRINTS | E-class P450 group I signature | 445 | 455 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1015 | 509 | Gene3D | Cytochrome P450 | 24 | 508 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1015 | 509 | PRINTS | P450 superfamily signature | 365 | 376 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1015 | 509 | PRINTS | P450 superfamily signature | 455 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1015 | 509 | PRINTS | P450 superfamily signature | 446 | 455 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1015 | 509 | PRINTS | P450 superfamily signature | 302 | 319 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1015 | 509 | FunFam | Cytochrome P450 | 22 | 509 | - | - | |
| Cone4ag1015 | 509 | Pfam | Cytochrome P450 | 84 | 497 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1015 | 509 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 448 | 457 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone2ag0628 | Cone-Chr2:4018481 | Cone4ag1015 | Cone-Chr4:8861130 | 1.00E-121 | dispersed | |
| Cone4ag1015 | Cone-Chr4:8861130 | Cone8ag0297 | Cone-Chr8:1714016 | 2.88E-231 | dispersed | |
| Cone1ag0585 | Cone-Chr1:5854590 | Cone4ag1015 | Cone-Chr4:8861130 | 3.64e-313 | wgd | |
| Cone4ag1015 | Cone-Chr4:8861130 | Cone5ag1095 | Cone-Chr5:4872207 | 1.99e-310 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone4ag1015 | K15401 | - | rcu:8276374 | 866.685 |