Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1032 ATGGATCACAGTGGGCATCATGATATGCATGGGATGGGAAGCATTCCCCCATCATCAGCACCATCAACATCGTCACCTCATCATCAGCGGATGATGATGATGCACATGACCTTCTTCTGGGGAAAGAACACAGAGATTCTCTTCGACAACTGGCCTGGGACCCGCACCGGTATGTACGCTTTAGCTTTGGTATTTGTCTTCCTGCTGGCTTTTCTAACCGAGTGGCTTTCTTACTGTCGGTTCATCAAACCCGACTCGAGCAGTCACTTGGTGGCCGGTCTGTTGCAGACCTTCTTGTATGCTGTAAGGACCGGGCTTATCTATATGGTGATGTTGGCTGTTATGTCGTTTAACGTCGGTGTGTTTTTGGTTGCTGTAAGTGGCCACAGTCTGGGTTTCTTCTTGTTTGGGAGTTGTGTTTTCAACAAATCTAATCGTGGGAAAGGTTCTGATCTTCCTCCTATGAGCTGTTGA 474 47.89 MDHSGHHDMHGMGSIPPSSAPSTSSPHHQRMMMMHMTFFWGKNTEILFDNWPGTRTGMYALALVFVFLLAFLTEWLSYCRFIKPDSSSHLVAGLLQTFLYAVRTGLIYMVMLAVMSFNVGVFLVAVSGHSLGFFLFGSCVFNKSNRGKGSDLPPMSC 157
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8999297 8999770 + Conep04aG0106900.1 Cone4ag1032 436010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1032 157 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 31 145 IPR007274 GO:0005375(PANTHER)|GO:0005375(InterPro)|GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0035434(InterPro)
Cone4ag1032 157 Pfam Ctr copper transporter family 90 136 IPR007274 GO:0005375(InterPro)|GO:0016020(InterPro)|GO:0035434(InterPro)
Cone4ag1032 157 Pfam Ctr copper transporter family 36 80 IPR007274 GO:0005375(InterPro)|GO:0016020(InterPro)|GO:0035434(InterPro)
Cone4ag1032 157 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1364 Cone-Chr19:9036288 Cone4ag1032 Cone-Chr4:8999297 1.19E-35 dispersed
Cone4ag1032 Cone-Chr4:8999297 Cone4ag1033 Cone-Chr4:9003940 1.06E-42 tandem
Cone13ag1369 Cone-Chr13:9997541 Cone4ag1032 Cone-Chr4:8999297 1.34E-32 wgd
Cone4ag1032 Cone-Chr4:8999297 Cone7ag1094 Cone-Chr7:8292041 1.42E-62 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1032 K14686 - rcu:8279809 182.57