Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1044 ATGGCTTCCACTCCATACATCAAAATTTCCTTAATTAAATCAACCTCTCTACTTCTTTTTTCCATCATTCTATCTCTGCAACTTTCCCTGATCAAAGCTCATGGTGGAGACGGCGAAAGTGATAGTGATGGTGACAAGGTTGACTTACATGGGAGGGGTCTAATTCTAGTCAAAATATGGTGCCTGATTATTCTTCTTGTTAGCACATTTGCAGGTGGAGTTTCCCCTTACTTTTTTCGTTGGAACGAAAGCTTTCTCTTATTGGGAACACAATTTGCAGCCGGAGTTTTTCTGGGTACTTCATTGATGCATTTCTTGAGTGATTCAAACGAGACGTTTATCGATCTAACAAGCAAAACATACCCATTTTCGTTCATGTTAGCCTCATCCGGTTATCTATTGACTATGCTTGGTGATTGTTTAGTAATCTATGCTACAAGGAATGTAACTAGGCATGGAGAAAATAGTAGAGTTGAAGTGGAAGAAGGCAGAGTAAATGCTCATGATCATAAAGAGGGAGGAGTTGACGATCATCATGTCAATCCGGTTTTCTTGAAGACAACATCTTTCGCGGATACAATTCTACTCATCCTTGCTTTATGTTTCCATTCAGTTTTTGAGGGGATTGCTGTCGGAGTTGCAGGTACCAAGGGAGATGCTTGGAAGAACCTGTGGACAATATCACTGCACAAAATTTTTGCAGCAATTGGGATGGGAATAGCGCTGCTAAGGATGTTACCAACAAGGCCATTTGTAACAACCGCTGCCTATTCTTTTGCCTTTGCGATATCAAGCCCAATTGGAGTGGGAATAGGAATTGCTATTGACGCAACAACGCAAGGGCATGTAGCCGATTGGATATATGCCATTTCCATGGGAATTGCTTGTGGGGTGTTCATTTATGTGGCTATTAACCATCTTATGGCCAAAGGCTTTAAGCCACAAGATAAGTGTTATTTCGATACTCCCTACTACAAGTTTCTGGCTGTGCTTCTCGGGGTTGCTGTTATAGCAGTTGTTATGATCTGGGATACGTAG 1038 41.52 MASTPYIKISLIKSTSLLLFSIILSLQLSLIKAHGGDGESDSDGDKVDLHGRGLILVKIWCLIILLVSTFAGGVSPYFFRWNESFLLLGTQFAAGVFLGTSLMHFLSDSNETFIDLTSKTYPFSFMLASSGYLLTMLGDCLVIYATRNVTRHGENSRVEVEEGRVNAHDHKEGGVDDHHVNPVFLKTTSFADTILLILALCFHSVFEGIAVGVAGTKGDAWKNLWTISLHKIFAAIGMGIALLRMLPTRPFVTTAAYSFAFAISSPIGVGIGIAIDATTQGHVADWIYAISMGIACGVFIYVAINHLMAKGFKPQDKCYFDTPYYKFLAVLLGVAVIAVVMIWDT 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9090470 9091507 + Conep04aG0108200.1 Cone4ag1044 436022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1044 345 Pfam ZIP Zinc transporter 56 340 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Cone4ag1044 345 PANTHER ZINC/IRON TRANSPORTER 55 343 - GO:0005385(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1044 Cone-Chr4:9090470 Cone9ag0013 Cone-Chr9:83220 4.33E-120 dispersed
Cone4ag1044 Cone-Chr4:9090470 Cone7ag1083 Cone-Chr7:8226035 2.32E-221 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1044 K14709 - mdm:103447517 501.516