Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1045 ATGCAGCCAGCTCTACTCACAATCTTCTCCCACCTATCATCAACTTCATCTTGTTCTTCTTCATGTTCTCAAAATGATTACCAATTACTAACCATTTTCTTCTCCTCCCTCTTGTTAATAATCATCTACCATCTGCAATGGCACCACCCAAAACACAAGCGGCTGCCACCTGGCTCAATGGGCTGGCCTTACATTGGAGAAACCCTAAAGCTCTACACAGAAAACCCAAACTCTTTCTTCTCCAACAGGCAGAAGCGTTATGGTGACATATTCAAGACCCATATATTGGGCTGTCCTTGTGTCATGATCTCAAGCCCAGAGGCGGCTAAGAGCGTTCTTGTCAGCCGAGCTCATCTCTTTAAACCCACTTTCCCGCCTAGCAAAGAGAAGATGATTGGGCCAGAAGCTCTCTTCTTTCACCAAGGTCCTTACCATTCTAGGCTCAAGAAACTTGTCCAGTCTTCTTTACTCCCTTGTAAAATTAAATCCCATGTTCAAGAAATTGAGCAAACCGTGCTCAAACTTCTCCCCACTTGGAAAATCAATCCCGATTCCGTCAACACTCTGCAAGAGATGAAACGATACGCGTATGATGTGGCGATGATATCGGCATTTGGGGATATTAGTGATAATGAGAAGCAAGATTTTGAGAGGGAAGGGACTAAGAAACTGTATCTGTGTTTGGAAAAGGGTTATAATTCAATGCCGTTAGATCTGCCCGGAACTCCGTTTCGGAAAGCGATGAAGGCGAGGAAGCTGCTGAATGCGACGTTGAAGAGGTTGATAGAGAAGAGAAGAGAGAGAAGGGAACATGGTGGAGGTTTGTTGGGAGTCTTATTGGCAGCATCTGAACAAGAGAAAAACATGATCAAACCAACTAATAATAATGATCACCACGGTAATCACAATGATGAGCTAATCACAGATTCTCAGATTGCTGATAACTTGATAGGAGTAATATTTGCCGCACACGACACTACGGCCAGTGTTCTTACATGGCTGGTCAAGTACTTGAACGATAATCAGGACCTTCTTCAAGCTGTAACGAGGGAACAGGAAGCAATACTTAGAAGCAAAATGGTGGAAGGAAATCGAGGGCTGACGTGGGAGGATAGTAGGCGGATGCCGTTGACCAGCAGGGTGATACAAGAGACGCTTAGAACGGCGAGCATACTATCATTCACGTTCAGAGAAGCAGTGCAAGATGTGGAGTTTGAGGGCTACTTCATTCCCAAAGGTTGGAAGGTTCTTCCGCTCTTCAGAACAATTCATCACTCCGCTGATTTCTTCCCTCAGCCCGAGAAATTTGACCCTTCAAGATTCGAGGTGCCACCAAGACCAAACACGTATATGCCGTTTGGAAACGGAGTGCATTCGTGTCCAGGCAGTGAACTGGCCAAGCTCGAGATGCTTATCCTACTCCATCACCTTACCACTACTTACAGGTGGAAAGTGATCGGAGATGAGGAAGGAATACAGTACGGACCTTTTCCAGTGCCCAAACGTGGCTTACCTATTAAGGTTTTTCCGATCAACAAGAAGGCGGCGGCTGATTGA 1557 45.6 MQPALLTIFSHLSSTSSCSSSCSQNDYQLLTIFFSSLLLIIIYHLQWHHPKHKRLPPGSMGWPYIGETLKLYTENPNSFFSNRQKRYGDIFKTHILGCPCVMISSPEAAKSVLVSRAHLFKPTFPPSKEKMIGPEALFFHQGPYHSRLKKLVQSSLLPCKIKSHVQEIEQTVLKLLPTWKINPDSVNTLQEMKRYAYDVAMISAFGDISDNEKQDFEREGTKKLYLCLEKGYNSMPLDLPGTPFRKAMKARKLLNATLKRLIEKRRERREHGGGLLGVLLAASEQEKNMIKPTNNNDHHGNHNDELITDSQIADNLIGVIFAAHDTTASVLTWLVKYLNDNQDLLQAVTREQEAILRSKMVEGNRGLTWEDSRRMPLTSRVIQETLRTASILSFTFREAVQDVEFEGYFIPKGWKVLPLFRTIHHSADFFPQPEKFDPSRFEVPPRPNTYMPFGNGVHSCPGSELAKLEMLILLHHLTTTYRWKVIGDEEGIQYGPFPVPKRGLPIKVFPINKKAAAD 518
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 9101115 9104651 + Conep04aG0108300.1 Cone4ag1045 436023
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1045 518 CDD CYP90-like 83 510 - -
Cone4ag1045 518 PANTHER CYTOCHROME P450 26 54 489 - GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Cone4ag1045 518 Gene3D Cytochrome P450 46 511 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1045 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone4ag1045 518 FunFam Abscisic acid 8 45 510 - -
Cone4ag1045 518 SUPERFAMILY Cytochrome P450 48 510 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1045 518 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1045 518 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1045 518 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1045 518 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1045 518 Pfam Cytochrome P450 56 488 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1045 518 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1045 518 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1045 518 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1045 518 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1045 518 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1045 518 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1045 518 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1045 Cone-Chr4:9101115 Cone9ag0347 Cone-Chr9:1528409 2.83E-189 dispersed
Cone1ag0625 Cone-Chr1:6077184 Cone4ag1045 Cone-Chr4:9101115 2.34E-203 wgd
Cone4ag1045 Cone-Chr4:9101115 Cone7ag1082 Cone-Chr7:8217629 2.16E-306 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1045 K09843 - mdm:103420642 718.383