Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone4ag1045 | ATGCAGCCAGCTCTACTCACAATCTTCTCCCACCTATCATCAACTTCATCTTGTTCTTCTTCATGTTCTCAAAATGATTACCAATTACTAACCATTTTCTTCTCCTCCCTCTTGTTAATAATCATCTACCATCTGCAATGGCACCACCCAAAACACAAGCGGCTGCCACCTGGCTCAATGGGCTGGCCTTACATTGGAGAAACCCTAAAGCTCTACACAGAAAACCCAAACTCTTTCTTCTCCAACAGGCAGAAGCGTTATGGTGACATATTCAAGACCCATATATTGGGCTGTCCTTGTGTCATGATCTCAAGCCCAGAGGCGGCTAAGAGCGTTCTTGTCAGCCGAGCTCATCTCTTTAAACCCACTTTCCCGCCTAGCAAAGAGAAGATGATTGGGCCAGAAGCTCTCTTCTTTCACCAAGGTCCTTACCATTCTAGGCTCAAGAAACTTGTCCAGTCTTCTTTACTCCCTTGTAAAATTAAATCCCATGTTCAAGAAATTGAGCAAACCGTGCTCAAACTTCTCCCCACTTGGAAAATCAATCCCGATTCCGTCAACACTCTGCAAGAGATGAAACGATACGCGTATGATGTGGCGATGATATCGGCATTTGGGGATATTAGTGATAATGAGAAGCAAGATTTTGAGAGGGAAGGGACTAAGAAACTGTATCTGTGTTTGGAAAAGGGTTATAATTCAATGCCGTTAGATCTGCCCGGAACTCCGTTTCGGAAAGCGATGAAGGCGAGGAAGCTGCTGAATGCGACGTTGAAGAGGTTGATAGAGAAGAGAAGAGAGAGAAGGGAACATGGTGGAGGTTTGTTGGGAGTCTTATTGGCAGCATCTGAACAAGAGAAAAACATGATCAAACCAACTAATAATAATGATCACCACGGTAATCACAATGATGAGCTAATCACAGATTCTCAGATTGCTGATAACTTGATAGGAGTAATATTTGCCGCACACGACACTACGGCCAGTGTTCTTACATGGCTGGTCAAGTACTTGAACGATAATCAGGACCTTCTTCAAGCTGTAACGAGGGAACAGGAAGCAATACTTAGAAGCAAAATGGTGGAAGGAAATCGAGGGCTGACGTGGGAGGATAGTAGGCGGATGCCGTTGACCAGCAGGGTGATACAAGAGACGCTTAGAACGGCGAGCATACTATCATTCACGTTCAGAGAAGCAGTGCAAGATGTGGAGTTTGAGGGCTACTTCATTCCCAAAGGTTGGAAGGTTCTTCCGCTCTTCAGAACAATTCATCACTCCGCTGATTTCTTCCCTCAGCCCGAGAAATTTGACCCTTCAAGATTCGAGGTGCCACCAAGACCAAACACGTATATGCCGTTTGGAAACGGAGTGCATTCGTGTCCAGGCAGTGAACTGGCCAAGCTCGAGATGCTTATCCTACTCCATCACCTTACCACTACTTACAGGTGGAAAGTGATCGGAGATGAGGAAGGAATACAGTACGGACCTTTTCCAGTGCCCAAACGTGGCTTACCTATTAAGGTTTTTCCGATCAACAAGAAGGCGGCGGCTGATTGA | 1557 | 45.6 | MQPALLTIFSHLSSTSSCSSSCSQNDYQLLTIFFSSLLLIIIYHLQWHHPKHKRLPPGSMGWPYIGETLKLYTENPNSFFSNRQKRYGDIFKTHILGCPCVMISSPEAAKSVLVSRAHLFKPTFPPSKEKMIGPEALFFHQGPYHSRLKKLVQSSLLPCKIKSHVQEIEQTVLKLLPTWKINPDSVNTLQEMKRYAYDVAMISAFGDISDNEKQDFEREGTKKLYLCLEKGYNSMPLDLPGTPFRKAMKARKLLNATLKRLIEKRRERREHGGGLLGVLLAASEQEKNMIKPTNNNDHHGNHNDELITDSQIADNLIGVIFAAHDTTASVLTWLVKYLNDNQDLLQAVTREQEAILRSKMVEGNRGLTWEDSRRMPLTSRVIQETLRTASILSFTFREAVQDVEFEGYFIPKGWKVLPLFRTIHHSADFFPQPEKFDPSRFEVPPRPNTYMPFGNGVHSCPGSELAKLEMLILLHHLTTTYRWKVIGDEEGIQYGPFPVPKRGLPIKVFPINKKAAAD | 518 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 9101115 | 9104651 | + | Conep04aG0108300.1 | Cone4ag1045 | 436023 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone4ag1045 | 518 | CDD | CYP90-like | 83 | 510 | - | - | |
| Cone4ag1045 | 518 | PANTHER | CYTOCHROME P450 26 | 54 | 489 | - | GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Cone4ag1045 | 518 | Gene3D | Cytochrome P450 | 46 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1045 | 518 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 453 | 462 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone4ag1045 | 518 | FunFam | Abscisic acid 8 | 45 | 510 | - | - | |
| Cone4ag1045 | 518 | SUPERFAMILY | Cytochrome P450 | 48 | 510 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1045 | 518 | PRINTS | P450 superfamily signature | 451 | 460 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1045 | 518 | PRINTS | P450 superfamily signature | 322 | 339 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1045 | 518 | PRINTS | P450 superfamily signature | 460 | 471 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1045 | 518 | PRINTS | P450 superfamily signature | 380 | 391 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1045 | 518 | Pfam | Cytochrome P450 | 56 | 488 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1045 | 518 | PRINTS | E-class P450 group I signature | 419 | 443 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1045 | 518 | PRINTS | E-class P450 group I signature | 450 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1045 | 518 | PRINTS | E-class P450 group I signature | 460 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1045 | 518 | PRINTS | E-class P450 group I signature | 84 | 103 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1045 | 518 | PRINTS | E-class P450 group I signature | 311 | 328 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1045 | 518 | PRINTS | E-class P450 group I signature | 331 | 357 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1045 | 518 | PRINTS | E-class P450 group I signature | 379 | 397 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone4ag1045 | Cone-Chr4:9101115 | Cone9ag0347 | Cone-Chr9:1528409 | 2.83E-189 | dispersed | |
| Cone1ag0625 | Cone-Chr1:6077184 | Cone4ag1045 | Cone-Chr4:9101115 | 2.34E-203 | wgd | |
| Cone4ag1045 | Cone-Chr4:9101115 | Cone7ag1082 | Cone-Chr7:8217629 | 2.16E-306 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone4ag1045 | K09843 | - | mdm:103420642 | 718.383 |