Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1110 ATGGTTCCGATGAAGAAGACTGCTACTTCAACGAGCTGGATTTGTGTAGATCATGATGGAAAGAGTAACATTTTGGATGTAGATAAACATGTTATTAGGCAGAGAGTTCAGATTCATGCCAGAGATCTTCGAATTCTGGACCCACTCTTATCTTATCCTTCCACTATCTTAGGCAGAGAAAGACACAACAAAGCTATAATCACTGCAGATGAGGTATTGCTTGGAGATCCTTTGGATGAAAACGTAGTTCCTATTGTTGAGGAACTCAGAAGAAGGTTACCTTTGGTAAATTCCGGTTTCCAAGGCCAAGGAGAAGAAGCAGAAGAACTGGCCGATCCTCAAAACGACGTTGAAAACGGCAAAGAAAACAGAATAAATTTGAAATTTCCAATTGAATTCCGGTCTTCGGAAATCACAGTAGAGGCAATTTGTAGCTTTCTTGATGCTCAAACAAGAGAACTTGAGACTGAAACTTATCCACCTTTAGATGAGCTCACCTCCAAAATTAGCAGTCTTAATCTCGACAGAGTGCGTAAACTCAAAAGCACAATGACAAGGTTGACAAATCGAGTTCAAAGGGTAAGAGATGACCTTGAACAGCTCCTTGACGACGATGATGTCATGGCAGAACTTCTCCTAGCTCGTTTCTTAACTCTCCTAATAGCTCCAACATATCCGGAACAAGCAGGACTAGTGGGAGAACAAGTCAAGGAGGGAATTAGAAATGTGGAGCTGTTTCTGAGTATTGGGACGGTTTGCTTGACTGTGTATTCTTTGGTGGCTGCTATTTTCGGGATGAATATCCCCTACACATGGAAGAAAGGCCATGAATACGTGTCCATATGGGTACTTATATATGTATATGTGTATATGTATGCTGACTATATTCATATGCATGCTTTGATCCTAACCGGTGTCTATTCTTGA 927 40.99 MVPMKKTATSTSWICVDHDGKSNILDVDKHVIRQRVQIHARDLRILDPLLSYPSTILGRERHNKAIITADEVLLGDPLDENVVPIVEELRRRLPLVNSGFQGQGEEAEELADPQNDVENGKENRINLKFPIEFRSSEITVEAICSFLDAQTRELETETYPPLDELTSKISSLNLDRVRKLKSTMTRLTNRVQRVRDDLEQLLDDDDVMAELLLARFLTLLIAPTYPEQAGLVGEQVKEGIRNVELFLSIGTVCLTVYSLVAAIFGMNIPYTWKKGHEYVSIWVLIYVYVYMYADYIHMHALILTGVYS 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9607687 9609587 + Conep04aG0115500.1 Cone4ag1110 436088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1110 308 Coils Coil 177 204 - -
Cone4ag1110 308 Pfam Magnesium transporter MRS2-like 25 214 - -
Cone4ag1110 308 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 243 297 IPR045863 -
Cone4ag1110 308 Gene3D - 2 77 - -
Cone4ag1110 308 Gene3D Magnesium transport protein CorA, transmembrane region 85 250 - -
Cone4ag1110 308 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 241 289 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1110 Cone-Chr4:9607687 Cone7ag1020 Cone-Chr7:7874808 1.60E-137 dispersed
Cone17ag0276 Cone-Chr17:1309074 Cone4ag1110 Cone-Chr4:9607687 1.23E-50 wgd
Cone20ag1134 Cone-Chr20:7734583 Cone4ag1110 Cone-Chr4:9607687 2.37E-51 wgd
Cone4ag0290 Cone-Chr4:1342275 Cone4ag1110 Cone-Chr4:9607687 8.77E-29 wgd
Cone4ag1110 Cone-Chr4:9607687 Cone7ag0295 Cone-Chr7:1272309 7.94E-17 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1110 K16075 - vvi:100246066 308.916