Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1129 ATGGCTAAGGAACAACTACAAGTCCTCAACGCACTGGACTTAGCGAAAACACAATGGTATCATTTCACAGCGATCGTTATTGCCGGAATGGGATTCTTCACAGATGCGTATGATCTTTTCTGCATTTCCCTCGTCACCAAATTGCTCGGCCGCATATACTACCACGTAGACAATGCACCCAAACCCGGCACGTTACCGCCTAATGTGTCGGCCGCAGTTAATGGTGTAGCATTCTGTGGGACCCTAGCCGGTCAGCTCTTCTTTGGTTGGCTAGGTGATAAAATGGGCCGAAAACGTGTATACGGCATGACCCTTATGGTAATGGTCATATGTTCTGTCGCCTCAGGCCTTTCCTTTGGTCATAGCGCCAAATCAGTAATGACAACCCTTTGCTTCTTCCGGTTCTGGCTCGGGTTCGGTATTGGTGGTGATTACCCACTTTCCGCCACCATCATGTCCGAGTATGCTAATAAGAAGACCCGTGGTGCGTTTATAGCCGCAGTTTTCGCTATGCAGGGGTTTGGTATCTTGGCTGGTGGTATATTCGCAATCATCATATCATCTGCGTTCAAGGCCAAGTTTGATGCTCCAGCCTATGAAGTTGATCCCGCTGGGTCCACAGTGGCCCAAGCAGACTATGTTTGGAGGATTATTCTAATGGTTGGAGCTCTTCCGGCTGCTCTTACCTACTATTCACGGAGCAAGATGCCAGAAACGGCTCGTTACACTGCTCTTGTGGCCAAGAATACTAAGCAAGCTGCATCTGATATGGCTAAGGTTTTGAACATGGATATTGAAGCAGAGCCACAAAAGGTCGAGCAAGTATCCAAGGAGGAAGCAAACTCATTTGGTTTGTTCTCCAAACAGTTCCTTGCTCGTCACGGGCTTCACTTGCTCGGAACGACTACGACTTGGTTCTTACTTGACATTGCGTTTTACAGTCAGAATCTTTTTCAGAAAGACATCTTTAGTGCAATCGGATGGATTCCTCCGGCAAAGACCATGAATGCTATTGACGAGGTGTATAGAATCGCTAGAGCACAAACACTTATCGCACTTTGCAGTACAGTTCCCGGATACTGGTTCACGGTAGCTTTTATTGACAGGATGGGAAGATTCGCGATCCAGATGATGGGTTTCTTTTTCATGACGGTGTTTATGTTTGCATTGGCTATTCCTTACGACCATTGGACTCACAAAGACAACCGGATTGGATTCGTCGTGATGTACTCATTGACGTTCTTTTTTGCCAATTTTGGACCTAATGCCACTACATTTGTTGTACCGGCTGAAATTTTCCCGGCTAGGCTTCGGTCTACTTGCCATGGTATATCGGCAGCATCTGGGAAGCTTGGCGCTATGGTGGGTGCATTCGGGTTTCTGTATTTGGCTCAAAATAAGGATAAAGCCAAGGCTGATGCGGGTTACCCGGCTGGTATTGGAGTGAAAAATTCACTTCTTCTGTTGGGAGGAGTTAACTTGTTGGGAATGTTGTTTACATTTCTGGTTCCAGAATCGAAAGGAAAGTCCTTGGAGGAGATTTCGGGGGAGAACGATGATGAAACTGATCAATCCAGAGCGGATTTGGAGCAGTCGTTGTCTCATAACATTAGAACAGTTCCGGTTGCTTAG 1632 46.69 MAKEQLQVLNALDLAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDNAPKPGTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMVMVICSVASGLSFGHSAKSVMTTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFAIIISSAFKAKFDAPAYEVDPAGSTVAQADYVWRIILMVGALPAALTYYSRSKMPETARYTALVAKNTKQAASDMAKVLNMDIEAEPQKVEQVSKEEANSFGLFSKQFLARHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMNAIDEVYRIARAQTLIALCSTVPGYWFTVAFIDRMGRFAIQMMGFFFMTVFMFALAIPYDHWTHKDNRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAMVGAFGFLYLAQNKDKAKADAGYPAGIGVKNSLLLLGGVNLLGMLFTFLVPESKGKSLEEISGENDDETDQSRADLEQSLSHNIRTVPVA 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9741679 9743310 + Conep04aG0117500.1 Cone4ag1129 436107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1129 543 NCBIfam phosphate:H+ symporter 11 517 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Cone4ag1129 543 FunFam Inorganic phosphate transporter 1-6 20 528 - -
Cone4ag1129 543 CDD MFS_PhT 25 507 - -
Cone4ag1129 543 MobiDBLite consensus disorder prediction 512 528 - -
Cone4ag1129 543 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 10 513 - -
Cone4ag1129 543 MobiDBLite consensus disorder prediction 512 534 - -
Cone4ag1129 543 Gene3D MFS general substrate transporter like domains 20 531 IPR036259 -
Cone4ag1129 543 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 508 IPR020846 GO:0022857(InterPro)
Cone4ag1129 543 Pfam Sugar (and other) transporter 26 515 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone4ag1129 543 SUPERFAMILY MFS general substrate transporter 12 515 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0149 Cone-Chr14:729037 Cone4ag1129 Cone-Chr4:9741679 8.72E-87 dispersed
Cone17ag0613 Cone-Chr17:3385898 Cone4ag1129 Cone-Chr4:9741679 3.83e-317 dispersed
Cone17ag1476 Cone-Chr17:9968841 Cone4ag1129 Cone-Chr4:9741679 7.70E-60 dispersed
Cone20ag0800 Cone-Chr20:5678006 Cone4ag1129 Cone-Chr4:9741679 1.07E-171 dispersed
Cone4ag1129 Cone-Chr4:9741679 Cone5ag0654 Cone-Chr5:2795789 5.54E-38 dispersed
Cone17ag0612 Cone-Chr17:3378888 Cone4ag1129 Cone-Chr4:9741679 0 wgd
Cone4ag0326 Cone-Chr4:1480205 Cone4ag1129 Cone-Chr4:9741679 1.33E-300 wgd
Cone4ag1129 Cone-Chr4:9741679 Cone7ag0321 Cone-Chr7:1397719 2.07E-304 wgd
Cone4ag1129 Cone-Chr4:9741679 Cone7ag0999 Cone-Chr7:7720701 9.83E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1129 K08176 - rcu:8289773 920.998