Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1187 ATGTCTGAAACATCATCGTATTGCAGTGCCAATGTCGGCGGAGTGCCATGTTCGGAATCAGAGCCAGGCCCTGTTGTCCCCACAACCCCTCTACTCACCTTCCTTCAATGTCTCCAAAAAACCGCCCACATCACCTTCTCCAACAAATCCCTTCCCCTCGACCCAAAACTCTACGTTGATCTCTCTCTAAAATTCGATCTCTCCAAAACTGAACTCGGCTTCAACGACCTTCCCCGGTCGTCGAATGGGTCGGTCTCACCGGTCAAAGATTTGGAAGATTTCATCGAGGACTACTTTGAGGGTGCAGGGGATGATCTGGTGCATGCAGAACCAGCGGATTACGTTCCCGAGCCCCATGGGTTCTTGCCCAAGGTCGAGAACTCAGAGGTCAGAGCTTGGGCCTTGGAAGTGCATTCTCTTTGGAAGAATCTAAGCCGGAGAGTCTCTGATCAGGTCTTGAATCGGCCAACATTCCATACTCTGCTTCCGCTTAAGCAGCCTATTGTCATTCCCGGCTCCCGGTTCAGAGAGGTCTATTACTGGGATTCTTACTGGATCATCCGAGGTTTGCTAGCAAGCAAAATGTATGAGACGGCGAAATCGATTGCGACGAATCTGATTTCGCTTGTGGAGGAGTATGGCTTTGTTCCTAATGGTGCTAGAGCTTATTACACTAATAGAAGTCAGCCTCCCCTTCTAAGTGCTATGATTTATGAGATATACAACACGACGGCCGACATTCACTTAGTTGTAAAGGCTCTCCCTGCACTGCTCAAAGAACACGAGTTCTGGAATTCAGGAATACATAAAGTTACCATTCAGGATTCTGAAGGTTGCAACCATAATCTAAGTCGGTACTATGCAATGTGGAACAAGCCGAGGCCTGAGTCGTCAACGATAGATGAGGGAATCGCTTCTAAGCTCAAAGAACTTCCAGAAAAAGAACATGTTTACCGTGAATTGGCATCGACTGCTGAATCTGGATGGGACTTCAGTACAAGATGGATGAGGGATCCCTTAGATCTCGCATCTTTGGCTACAACTTCGATTTTGCCTGTTGATCTAAATGCATTTTTGCTCAGGATGGAACTTGATATTTCCTTCTTGGCAAAAGTTACTGGAGATAACGCAACTGCAGATTGCTTTTATGAAGCATCTCAAGCCAGACAGAGAGCAATTCATTCTGTTTTCTGGAATGCAAAGACTGGGCAATGGCTCGATTACTGGTTCAACAACAAATCATGTGAGAAATCCCGAATGTGGGAAGCACAGAACCAGAATCAAAATATAGTTGCTTCAAACTTCTTACCATTGTGGATCAAGCCCTTCTACTCAGATACTATCTTGTTGGAGAAAGTCATGAAAAGTTTCCGGAGCTCAGGCTTGCTTCGAGATGCCGGAATTGCGACTTCTTTGACCAGATCAGGACAGCAATGGGACTTTCCAAATGGTTGGGCACCAATCCAGCACATGATCGTCGAGGGTCTAGCTCGATCCGGATCGGAAGAGGCAAGAGCACTGGCTGAAGACATTGCAACAAGGTGGATCCGAACCAATTATGCAGCCTACAAGAAAACGGGAACAATGCATGAAAAATATGATGTGGAGAAGTGTGGAGAAATTGGAGGTGGTGGTGAATATGTACCTCAGACGGGATTTGGATGGTCAAATGGGGTTGTGTTAGCATTCTTAGAGGAGTTTGGATGGCCTAAAGACCGCAACATTCTTTGCTACTAG 1737 46.4 MSETSSYCSANVGGVPCSESEPGPVVPTTPLLTFLQCLQKTAHITFSNKSLPLDPKLYVDLSLKFDLSKTELGFNDLPRSSNGSVSPVKDLEDFIEDYFEGAGDDLVHAEPADYVPEPHGFLPKVENSEVRAWALEVHSLWKNLSRRVSDQVLNRPTFHTLLPLKQPIVIPGSRFREVYYWDSYWIIRGLLASKMYETAKSIATNLISLVEEYGFVPNGARAYYTNRSQPPLLSAMIYEIYNTTADIHLVVKALPALLKEHEFWNSGIHKVTIQDSEGCNHNLSRYYAMWNKPRPESSTIDEGIASKLKELPEKEHVYRELASTAESGWDFSTRWMRDPLDLASLATTSILPVDLNAFLLRMELDISFLAKVTGDNATADCFYEASQARQRAIHSVFWNAKTGQWLDYWFNNKSCEKSRMWEAQNQNQNIVASNFLPLWIKPFYSDTILLEKVMKSFRSSGLLRDAGIATSLTRSGQQWDFPNGWAPIQHMIVEGLARSGSEEARALAEDIATRWIRTNYAAYKKTGTMHEKYDVEKCGEIGGGGEYVPQTGFGWSNGVVLAFLEEFGWPKDRNILCY 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10048579 10052278 + Conep04aG0123300.1 Cone4ag1187 436165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1187 578 Gene3D - 42 574 IPR012341 GO:0005975(InterPro)
Cone4ag1187 578 PANTHER TREHALASE 47 574 IPR001661 GO:0004555(InterPro)|GO:0004555(PANTHER)|GO:0005991(InterPro)|GO:0005993(PANTHER)
Cone4ag1187 578 Pfam Trehalase 54 568 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Cone4ag1187 578 PRINTS Glycosyl hydrolase family 37 signature 318 335 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Cone4ag1187 578 PRINTS Glycosyl hydrolase family 37 signature 551 564 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Cone4ag1187 578 PRINTS Glycosyl hydrolase family 37 signature 350 367 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Cone4ag1187 578 PRINTS Glycosyl hydrolase family 37 signature 213 231 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Cone4ag1187 578 PRINTS Glycosyl hydrolase family 37 signature 283 300 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Cone4ag1187 578 PRINTS Glycosyl hydrolase family 37 signature 393 409 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Cone4ag1187 578 PRINTS Glycosyl hydrolase family 37 signature 471 487 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Cone4ag1187 578 MobiDBLite consensus disorder prediction 1 23 - -
Cone4ag1187 578 SUPERFAMILY Six-hairpin glycosidases 39 570 IPR008928 GO:0005975(InterPro)
Cone4ag1187 578 ProSitePatterns Trehalase signature 2. 478 487 IPR018232 GO:0004555(InterPro)|GO:0005991(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1187 K01194 - vvi:100246241 814.298