Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1204 ATGTCACTGAAGCTCGTCAACTCCTTCTCCGTAGCATTCATGTTGGGCTTCACTCTGTTGATCCTCTTGTTCTCTGGCTATCTCGAATTCCCTTCCCCTTCAAACGCACTTCAACCCAACCACGATCTCTATCTATCAGAAAACAAATCTACGCCAGAACCCTTCACCAGCTTGGTCACTGCCTTTAAGAAATGGGATTCTCAAGTGGGCTGTTCTCAATTCAGAGCGGAGATCGTCAATGGCTGGTCAAATCGATCATCTTCTTCGTTGCAAGAAGTCGGTGCTGGTGATTCGAACTGCAGAGATCTGAAAATGGAGCACGTGAGCGTGTTGGTGAAAGGTTGGACTTGGATTCCTGATAATTTGGACAATTTGTATTCTTGTCGTTGTGGGTTGACCTGCCTTTGGACCAAATCCTCTGTTCTTGCTGACCAGCCTGATGCTTTACTCTTTGAGACCACTACGCCTCCCCTTCAGAGACGTGTTGGAGATCCCCTACGCGTTTACATGGAACTTGAGGCTGGAAGGAAAAAGTCCGGTTTTGAGGACATTTTTATTAGTTATCACGCAAAAGATGATGTTCAGTCAACTTATGCTGGTTCACTCTTCCATAATGCTCGAAATTATTATGTCTCGCCTTCGAAGAATAATGATACTCTTGTATATTGGTCTTCATCAAGATGTCTTCCACAAAGAGACACGCTTGCCAGGAAGCTGCTAAGCTTACTACCCCACCATTCATTCGGCAAGTGCTTGAACAACGTAGGCGGCTTAGACATGGCTCTATCTCTCTATCCGGAATGTGAAAACAAAGAAAGCACGACCTCAAAATGGTGGGACCATTTGCATTGTGCTATGTCCCACTACAAGTTCGTTCTGGCAATAGAAAATACGAGGACAGAGAGTTACGTGACAGAGAAACTATTCTACGCACTAGATTCCGGAGCAGTTCCTATTTACTTTGGTGCCCCTAATGTCTGGGATTTTGTGCCTCCACATTCCATAATTGATGGATCTAGTTTCAGCTCATTGGAGAAATTGGCTTCATATGTTAAGGCCCTTGCAAATGACTCTGTAGCATATGCAGAATACCATGCATGGAGACGATGCGGTATAATGGGTAATTACAGGAAGACCCGTTCTGTTAGCCTTGACACTCTGCCGTGCCGTTTATGTGAAGTGGTTAGCAGAAGAGGTGGTAAGAATGCTATCTAG 1215 44.94 MSLKLVNSFSVAFMLGFTLLILLFSGYLEFPSPSNALQPNHDLYLSENKSTPEPFTSLVTAFKKWDSQVGCSQFRAEIVNGWSNRSSSSLQEVGAGDSNCRDLKMEHVSVLVKGWTWIPDNLDNLYSCRCGLTCLWTKSSVLADQPDALLFETTTPPLQRRVGDPLRVYMELEAGRKKSGFEDIFISYHAKDDVQSTYAGSLFHNARNYYVSPSKNNDTLVYWSSSRCLPQRDTLARKLLSLLPHHSFGKCLNNVGGLDMALSLYPECENKESTTSKWWDHLHCAMSHYKFVLAIENTRTESYVTEKLFYALDSGAVPIYFGAPNVWDFVPPHSIIDGSSFSSLEKLASYVKALANDSVAYAEYHAWRRCGIMGNYRKTRSVSLDTLPCRLCEVVSRRGGKNAI 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10115176 10117426 - Conep04aG0125000.1 Cone4ag1204 436182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1204 404 PIRSF FucT_plant 1 404 IPR017177 -
Cone4ag1204 404 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 100 397 - -
Cone4ag1204 404 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 104 398 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)|GO:0036065(PANTHER)|GO:0046920(PANTHER)
Cone4ag1204 404 Gene3D - 166 374 IPR038577 -
Cone4ag1204 404 FunFam Alpha-(1,4)-fucosyltransferase 167 373 - -
Cone4ag1204 404 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 217 398 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1204 Cone-Chr4:10115176 Cone7ag0922 Cone-Chr7:7237368 1.38E-267 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1204 K14412 - sly:543777 642.499