Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1269 ATGGCCATCTCTGATTTGGAGCGCCTAATTAGTTCTAGGCCTCGACCGCCGGCGCAAGCTAGAGTTCCGTTGAGACAGTTACTCCGAGTGACGTCAGTGGCGTGCGGGATTCAATTCGGCTGGGCTTTGCAGCTCTCTCTTCTCACTCCCTACGTGCAGGAGCTGGGGATTCCTCACGCTTGGGCTAGCGTTATCTGGCTTTGTGGCCCGCTATCGGGCCTTTTAGTCCAGCCACTTGTGGGCCACTCCAGCGATCGTTGCACCAGTCGATTTGGTCGCCGGAGGCCATTCATCGTTGCTGGAGCGGCGTTGATCGCCGTCGCCGTTTTGATTATTAGTTTCTCTGCGGATATAGGGTGGTTGCTTGGCGATAGAGGTAATGTTCGGCCAGCTGCGGTGGCGACCTTTGTGTTCGGGTTTTGGATTCTCGATGTTGCTAATAACATGACTCAGGGACCTTGTAGAGCTCTCCTCGCCGACCTTACTGGAAAGGATCATCGAAGGACTCGAGTGGCAAATGCATATTTTTCTCTGTTTATGGCTGTGGGTAATGTTCTGGGCTATGCCACTGGATCCTACAGTGGCTGGTTCAAGATTTTACCATTTACTCTTACATCCGCATGCAATGTTAACTGTGCAAACCTCAAGTCAGCTTTTATTATTGACATTATCTTCATTGCAATTACTACGTATTTGAGCATAACGGCAGCTAAAGAATTACCTCTAGACCCAAATAATAGATCCATGTCGACTGGTGAAGGGCCAGGACAGTCAAGCCATGTTCAAGAAGCTTTTCTTTGGGAGTTGTTTGGGACATTTAGATACTTCTCAGGGTCCATATGGGTAATCTTGTTTGTTGTTGCTCTGACCTGGATTGGGTGGTTTCCATTTCTTCTTTTTGATACTGACTGGATGGGCAGAGAGATTTATGGAGGCAAGCCAAATGATGGCCAGAGTTATAGTACTGGAGTGAGAATGGGTGCACTTGGTCTGATGTTGAACTCTATTGTTCTTGGAATAACTTCATTGCTCATGGAGAAACTCTGCAGAAAGTGGGGCGCTGGTTTTGTTTGGGGTATTTCAAATTTCCTCATGGCTCTTTGCTTTCTTGCAATGCTTGTTGTCACATTTGCTGCAAAAAGTATGGACTACTTGGGTCATAAGCAACCTCCAAGTGGCATTGTGATTGCTGCACTGGTCATTTTTGCAATTCTTGGTGTTCCACTGGCAATCACTTATAGTGTCCCATATGCCCTTATTTCCTCACGAATTGAGTCTATTGGACTTGGCCAAGGGCTATCCATGGGTGTATTAAATCTGGCTATAGTAGTCCCACAGGTCATAGTGTCTTTAGGAAGTGGACCTTGGGATCAGCTGTTTGGTGGTGGAAACTCTCCAGCCTTTGCTGTGGCAGCCCTTGCAGCCTTTGCAAGTGGTATTATTGCCATCTTGGCCATCCCACGCTCGGGTGCTCAGAAATCCAGATCTCGAATTTGA 1497 47.63 MAISDLERLISSRPRPPAQARVPLRQLLRVTSVACGIQFGWALQLSLLTPYVQELGIPHAWASVIWLCGPLSGLLVQPLVGHSSDRCTSRFGRRRPFIVAGAALIAVAVLIISFSADIGWLLGDRGNVRPAAVATFVFGFWILDVANNMTQGPCRALLADLTGKDHRRTRVANAYFSLFMAVGNVLGYATGSYSGWFKILPFTLTSACNVNCANLKSAFIIDIIFIAITTYLSITAAKELPLDPNNRSMSTGEGPGQSSHVQEAFLWELFGTFRYFSGSIWVILFVVALTWIGWFPFLLFDTDWMGREIYGGKPNDGQSYSTGVRMGALGLMLNSIVLGITSLLMEKLCRKWGAGFVWGISNFLMALCFLAMLVVTFAAKSMDYLGHKQPPSGIVIAALVIFAILGVPLAITYSVPYALISSRIESIGLGQGLSMGVLNLAIVVPQVIVSLGSGPWDQLFGGGNSPAFAVAALAAFASGIIAILAIPRSGAQKSRSRI 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10438174 10442388 + Conep04aG0131500.1 Cone4ag1269 436247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1269 498 PANTHER SUGAR TRANSPORTER 19 484 - GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0008506(PANTHER)|GO:0016020(PANTHER)
Cone4ag1269 498 NCBIfam sucrose/proton symporter 22 489 IPR005989 GO:0005886(InterPro)|GO:0008515(InterPro)|GO:0015770(InterPro)
Cone4ag1269 498 Gene3D MFS general substrate transporter like domains 23 485 IPR036259 -
Cone4ag1269 498 Pfam Major Facilitator Superfamily 33 443 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cone4ag1269 498 CDD MFS_SLC45_SUC 27 484 - -
Cone4ag1269 498 FunFam Sucrose transport protein 21 486 - -
Cone4ag1269 498 SUPERFAMILY MFS general substrate transporter 25 489 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0751 Cone-Chr17:5602000 Cone4ag1269 Cone-Chr4:10438174 1.05E-09 dispersed
Cone4ag1269 Cone-Chr4:10438174 Cone6ag0603 Cone-Chr6:2956879 9.92E-151 dispersed
Cone4ag1269 Cone-Chr4:10438174 Cone20ag0693 Cone-Chr20:4349018 2.32E-169 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1269 K15378 - vvi:100232844 785.408