Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1288 ATGGTAGCTTCGATCGTGAGGCTCTTCTTCAAGCTCTTTCTGATTTCAGCCATTTTGTGGTTGATTTTCAGATTTGCATCTAGGTTGCTGGCTTTGATTCTGAGACAGGTTGTTGGAGTATCAGTGACATTTCGGGTGGCTGGATGGAAATGTTTAAGGGATGTTGTGGTGAAGTTCAGAAAGGGTGCTATTGAATCTATATCTGTCGGCCAAATTAAACTCAGTTTATGCCAGCCGTTGGTCAAACTTGGAGTTGATTTTATTTCCAAGGATCCAAAGCTAGAAGTGTTAATATGTGACTTAGAAGTTGTGCTGAGGCCTTCAGATAAAAGCAAGTCAAAGTCCAAGCCTGGGAAATCTCGCACTTCAGGAAGGGGAAGGAGCAGGGGAAAGTGGAGAGTTGTAACTACCATTGCACGGTTTTTCTCTGTTTCTGTAACAGATTTTGCTCTTAAGACACCCAAAGTTACAATAGAAGTCAAGGCATTGAAATTAGATATATATAAAGATGGCAGATTGAGGCAAAATCTATTGGTCAAGATACAAATACTACCCACACTCCTTCATTCTAGGGAATCACTGGTTTGTGATGACCAATCTTCCAACTCTAGCAGTGGAGGATGCATCTCTGCTGGGAATTCACCCTTTACTATGATGGAAAAGTATTCTTCCCCTTTTATCTGTGAAGAATTCAGTCTGTCTTGTGAATGTGGTCATAAAAGGGAAGTTGGAGTATTCATCAAGAATGTGGATGTCACTTGTGGCGAGGTCACTGTGAATCTGAACGAGGAGCTGCTCTCAAGAAACAAGGTCTCAATGGAGAGTTCCACTTCCTCCAATAAAGCTGTAGATTCAACTGCTGATTCTCTGCCTTCTAAGAATCCACACAAAATGCAAGCCCTTTCATCTCTTTCAAAGTACACTTCCATGTTTCCGGAGAAGGTCTGCTTCTGTTTACCAAAGCTGAATGTTAGGTTTGTCCATCAGGAGCATGACCTTGTTGTTGAAAATAATATAATGGGTATTCAACTAAAAAGCATCAAATCAAAGTCATCTGAAGATGCGAGTGAGCGTGCATGCCTGGATGTTCAGCTGGAATTCAATGAGATTCATTTATACAGAGAAGTTGGAACTTCTGTTTTGGAGATACTGAAACTTGATGTGCTCTCTTTTGTTTACATTCCAGTACAGCCAACCTCATTTTTTAAAGCTGAAGTAGAGGTCAAGCTGGGAGGTACTCAGTGCAATATTATAATGAGTAGATTGGGGCCACTATTGCAGCTTAATTTCCCTAAAACGAAAAAGAAGGCTGTTCTGGAGGAAACTTCTGCTCTTGAAAAGTCGCCATCATCTGAATCCAAAGCAATAATGTGGACATGTACAGTCTCAGCCCCTGAGATGACTGTCATGCTTTATAGTATCAATGGCTTCCCTGTCTATCAGTGTTGCTCTCGAGCATCACATGTGTTTGCCAATAACACATCGAATATGGGAACTGTGGTACACATAGAACTTGGTGAAGTAAATTTGAACATGGCTGATGAATACCAAGAATCCTATAGGTTCAAGGACAGTCTTTTTGGCATCGAATTCAGTTCTGGTTGCATAATGCGCATAGCAAAGTTTAGTCTGGATTGGGGCAAAAAGGATAATGAACCAACCGAAGAAGATGGTCTTAGAAATAAAATGGTTGTGTCCACAAATGTGAGTGGTATGGGTATTTATTTTACTCTCCAGCGTGTTGAGTCACTTATATCAACTGCTATCTCCTTTCAAGCACTTTTAAAAAAACAGTCTGCTTCTACAAAAAAGGAAACACAAAGCAGTGGAGTGAAGCCAGCCAAGTCATCAAGGAAAGGAATTCAGCTATTGAAGTTCAGTCTAGAACAATGTTCTGTAAATTTTTGTGGTGATAATGTTTTGGGAAACACAGCTGTTGCAGATCCCAAACGCGTTAATTATGGATCACAGGGTGGTCAATTTGTTATTAGCGTCTCTGCTGATGGCACACCGCGTTGTGCACACGTGATGTCCACGATTTCGGATGAATGCAATAAGTTGAAGTATTCTATTTCTCTTGGAATCTTTCATTTCCATTTGAGTGTGAACAAGGAGAAACAGTTGACAAAGATAGAACTTGAAAGAGCAAGATCAATATATAAGGAATACTTTGACGAACAACAGCCAGCTACAAAAGTGACATTATTTGACATGCGGAATACTAAATTTGTAAGGCGTTCTAGTGGTGTCAAAGAGAGTCCTGTATGCTCCCTTTTTAGCGCTTCTAATATTGCACTCAGGTGGGAGCCTGATGTCCAACTATCTATCACTGAACTTGTTCTGCAACTGAAGTTACTGATTCACAACCAGAAGAAGCTTAAAGAAAGTGATAATGAATTTGTTAGAGATGCCTCTAGCCAGAGAGAGGCTGATCAGAAGAAAGAAACCATTCCAGAGTCAGGACACTCTGACAAGCAAAAGAATTGTGAAGAAATCTTTGCTATTGATATTGAAATGCTGAGTATATCTGCTGAAGTTGGAGATGGGGTTGATGCCATGGTTCAGGTTCAGTCAATATTCTCTGAGAATGCCCGCGTAGGAGTACTTTTGGAAGGACTTCTGCTTGGTATCAATAGGTGCAGAGTGCTCAAAAGTAGCCGAATGCAAATATTGCGGATTCCTACTGCCTCAAGTGGTTCATCTAATGCAAAAATGGTGGAAAATACCACAAGGGACTTGCTGATTCAGGGTCTTGATGTACATATATGTTTGCCATACCATTTGGAATTGCGTGCAATAGATGATTCTATTGAGGAAATGGTACGTGCATTGAAGCTTATCATTGCTGCTAAAACATCTCTTGCTTTTCCCAACAAGAAAGAAAGCCCAAAATCTAAATCTGGTTCTGTGGGACTTGGATGTGTAAAGTTTTTTATACGCAAGTTAACTGCAGAGATAGAGGATGAACCATTGCAGGGTTGGCTTGATGAACACTATCATCTGATGAAGAATGAGGCTTGTGAATTAGCTGCCCGATTAAAATTTCTTGATGACCTTACTTGCAAAACCAATCAGTGTCTAAAAAATGCTGAAACAAGTGATTCTGCTCAAGAAAGAAAGATGCACTACAATGGAGTTGAGATTGATGCTCAAGATCCTTCACCTATCTGCAGAATGCGGGAAGAAATATACAAACAGTCATTCCGTTCATATTATAATGCATGCCAAAACTTGGTGCCAAGCAAAGGTTCAGGTGCCTATCACGAAGGTTTCCAGGCTGGCTTTAAGCCTAGCACTAGGAGGACTTCTCTTCTTTCAATTTCTGTTTCGAATTTAGATGTAAGCCTGACATTAATCGATGGTGGAGATAATGGGATAATAGAGGTTCTAAAGAAGCTTGATCCTGTAGTTCACGAAAATAACATCCCATTTTCACGACTTTATGGGGGAAATATTATCTTGCGTGCAGGCTCTCTTGTTGCTCAGCTCCGTAACTACACATTTCCTCTTTTATCTGCAACTTCTATCAGCGGGGAAGGTCGTCTAGTGCTGGCACAGCAGGCTACATGTTTTCAACCTCAAATTTACCAAGATGTCTTCATAGGGAAATGGAGGAAGGTGCGAATGCTTCATTCTGCTAGAGGTACTACTCCACCGGTAAAATCATACTTGGATTTGCTGATTCGTTTTCAGAAAATGGAGGCATCCTTTGGAGTGGGTTTTGAACCAGTTTTTGCTGATGTGAGCTATGCTCTTACTATCGCTCTTCGCAGAGCTAATCTAAGTGTTCGGAATCCTGGCCCATTGATTCAGCCGCCAAAAAAGGAGAAGAATTTGCCTTGGTGGGATGATATGAGAAATTTTATTCACGGAAAGGTCTCCTTATGTCTTTCTGAAACTGTTTGGCATCTTCTTGCAACTACTGATCCTTATGAAAAGCTTGATAAACTTCTAGCTATATCTGGTCCTATGGAGGTCCACCAGTCAGATGGCCGTGTCTGTGGTACTGCAAAGGATTTCAGGTTTTATGCAAGCAGCTTAGAGAGTTTGGCTAATAATCGCTGTTTAAAACTTCCTAAGGGGATATCTACCCCACTGCTTGAAGTCCCAGCTTTTACCATTGAAGCTACAATGGACTGGGGGTGTGATTCTGGAACCCCACTGAACCATTATCTGCACGCATCTCCTATTGAGGGTGAATCTCATGAAAAGGTATTTGATCCCTTCAGGTCTACTTCTCTGTCGCTTCGGTTGAACATCTCTCTTAGATCTCCTCCCCTATGTGAGAAACAATCTCAATCTTCCAATGTGGTAAATCGAACTGATGGGACAGCCTACAGTCCTCATGAGCCTGAGAAAGCTTCAGTTAAGTTCCCTACATTATATCTTGGTGCCCATGATCTAGCATGGATCACTAAGTTCTGGATGATGCATTATTTGCCTCCGAAGAAATTGCGTTCCTTTGCTCGTTGGCCTCGTTTTGGAGTTCCAAGAGTTCCTAGGTCAGGTAATTTGTCCTTAGATAGAGTGATGACAGAATTTATGATCCGTGCAGAAGCTACTCCATTTTATGTAAAATATATTCCATTAGATGATGATGATGCAGCCAAAGGACTGACCTACAATATGGCAAAACTGAAGTTTGAACTCTGTAATAGCCGGGGTAAGCAGAAATTTACTTTCGAATGCAAGCGTCAACCTCTTGATCTTGTTTACCTGGGTTTTGACATTCATATGCTGCGTGCTTTTATTGATAAAGAAGATAGTACTAGCATTGAAAAGATAGCTCAAATGACAAAAAATTCTTCAATTGCATACATGGATAATTTTTCTAGTGAGAACTCAACGAACGATTGCACAGAGAAACATCGTGATGATGGGTTTCTTTTGTCGTCTGATTATTTCACAATCAAGAAGCAAACACCAAAGGCTGATCCTGCAAGCCTATTAGCCTGGCAAGAGGCTGGAAGAAGAAATCTTGAGATGACAGATGTGAGATCTGAGTATGAACATGGAAGTGAAAGTGATGAACACGCACGGTCCGATCCAAGTGATGATGAAGGATACAATGTGGTAATAGCTGACAACTGCAAGCGTGTTTTTGTTTATGGATTCAAGCTTTTATGGACCATTGAGAATAGGGATGCTGCCTTATCCTTCGGTCATGGGATGTCCAAATCATTTGAACGTTCAAAGCATTCTCCTCGGCAGCATGCACCTACGGCATTAGTGGAGGAGAACCAATTAGACAGTAAAGCTGAAAAGCAAAAAGAGAAAGGTGAACAACTAAAAGACTCTGAAGAGGAAGGGACTCGTCATTTTATGGTGAATATTATTGAACCACAATTTAATCTTCACTCAGAAGAAGCCAATGGTAGATTTCTGCTTGCAGCTGTTAGCGGTCGTGTTTTAGCCCGATCATTTCACTCAATTCTTGATGTTGGCTATGAGATGATTGAGAAAGCGGTTGGTACTAAAAATTCAAATATTCCCAACTGTGAACCTAAAATGATGTGGAAACGCATGGAGTTGTCTGCAATGTTGGAACACGTACAGGCTCATGTTGCACCAACTGATATCGATCCAGGGGCTGGAGTGCAGTGGCTTCCAAGAATTCGTAGAAGTTCTCCAAAAGTTAAGCGTACTGGTGCTTTACTGGAGAGAGTGTTTATGCCATGTGATATGTACTTCCGATACACGAGACACAAGGGTGGAACTCCAGAACTGAAGGTGAAGCCTCTAAAAGAGCTCACGTTCAATTCTCATAATATAGTGATGACAATGACATCTCATCAGTTCCGGGTTATGATGGATGTTTTGACCAACCTTCTCGCTACACGCATGCCCAAGTCTCGCAAAAGTAGCCTATCTTTTCTTGCTGAAGATGATGATGATTATATTGAAGAGGAAGCAGATCAGATGGTCCCTGTTGGTGTTGAAGAGGTAGAACTAGCGAAAGTGAACCTTGAACAAAAAGAGTGGGAACTAAAGTTGGTTTTTAAGGATATTTCAGAACTATCGTTTGGCACTGAATCTTTAAGTGACTTCTATCCAGAAAAGGAAGGTGATATGTGGATGATTGCATGTGGAAAATCATTGTTGGTTCAAGGACTAAAGAGAGAGCTTTTAAATGCAAAAAAATCTAGAAAGGCCGCATATGCATCCTTAAGAACAGCTCTGCTGAAGGCTGCTGAGATAAGATTGATGGAGAGGGAGAAGAACAAAAGACCTTCCCATGCTATGCGTGTTTCATTGAAAATTACTAAGGTGATTTGGAGCATGCTTCTAGATGGTAAATCTTTTGCAGAAGCTGAGATAAATGAGATGGTGAGTGTTTAA 6339 40.97 MVASIVRLFFKLFLISAILWLIFRFASRLLALILRQVVGVSVTFRVAGWKCLRDVVVKFRKGAIESISVGQIKLSLCQPLVKLGVDFISKDPKLEVLICDLEVVLRPSDKSKSKSKPGKSRTSGRGRSRGKWRVVTTIARFFSVSVTDFALKTPKVTIEVKALKLDIYKDGRLRQNLLVKIQILPTLLHSRESLVCDDQSSNSSSGGCISAGNSPFTMMEKYSSPFICEEFSLSCECGHKREVGVFIKNVDVTCGEVTVNLNEELLSRNKVSMESSTSSNKAVDSTADSLPSKNPHKMQALSSLSKYTSMFPEKVCFCLPKLNVRFVHQEHDLVVENNIMGIQLKSIKSKSSEDASERACLDVQLEFNEIHLYREVGTSVLEILKLDVLSFVYIPVQPTSFFKAEVEVKLGGTQCNIIMSRLGPLLQLNFPKTKKKAVLEETSALEKSPSSESKAIMWTCTVSAPEMTVMLYSINGFPVYQCCSRASHVFANNTSNMGTVVHIELGEVNLNMADEYQESYRFKDSLFGIEFSSGCIMRIAKFSLDWGKKDNEPTEEDGLRNKMVVSTNVSGMGIYFTLQRVESLISTAISFQALLKKQSASTKKETQSSGVKPAKSSRKGIQLLKFSLEQCSVNFCGDNVLGNTAVADPKRVNYGSQGGQFVISVSADGTPRCAHVMSTISDECNKLKYSISLGIFHFHLSVNKEKQLTKIELERARSIYKEYFDEQQPATKVTLFDMRNTKFVRRSSGVKESPVCSLFSASNIALRWEPDVQLSITELVLQLKLLIHNQKKLKESDNEFVRDASSQREADQKKETIPESGHSDKQKNCEEIFAIDIEMLSISAEVGDGVDAMVQVQSIFSENARVGVLLEGLLLGINRCRVLKSSRMQILRIPTASSGSSNAKMVENTTRDLLIQGLDVHICLPYHLELRAIDDSIEEMVRALKLIIAAKTSLAFPNKKESPKSKSGSVGLGCVKFFIRKLTAEIEDEPLQGWLDEHYHLMKNEACELAARLKFLDDLTCKTNQCLKNAETSDSAQERKMHYNGVEIDAQDPSPICRMREEIYKQSFRSYYNACQNLVPSKGSGAYHEGFQAGFKPSTRRTSLLSISVSNLDVSLTLIDGGDNGIIEVLKKLDPVVHENNIPFSRLYGGNIILRAGSLVAQLRNYTFPLLSATSISGEGRLVLAQQATCFQPQIYQDVFIGKWRKVRMLHSARGTTPPVKSYLDLLIRFQKMEASFGVGFEPVFADVSYALTIALRRANLSVRNPGPLIQPPKKEKNLPWWDDMRNFIHGKVSLCLSETVWHLLATTDPYEKLDKLLAISGPMEVHQSDGRVCGTAKDFRFYASSLESLANNRCLKLPKGISTPLLEVPAFTIEATMDWGCDSGTPLNHYLHASPIEGESHEKVFDPFRSTSLSLRLNISLRSPPLCEKQSQSSNVVNRTDGTAYSPHEPEKASVKFPTLYLGAHDLAWITKFWMMHYLPPKKLRSFARWPRFGVPRVPRSGNLSLDRVMTEFMIRAEATPFYVKYIPLDDDDAAKGLTYNMAKLKFELCNSRGKQKFTFECKRQPLDLVYLGFDIHMLRAFIDKEDSTSIEKIAQMTKNSSIAYMDNFSSENSTNDCTEKHRDDGFLLSSDYFTIKKQTPKADPASLLAWQEAGRRNLEMTDVRSEYEHGSESDEHARSDPSDDEGYNVVIADNCKRVFVYGFKLLWTIENRDAALSFGHGMSKSFERSKHSPRQHAPTALVEENQLDSKAEKQKEKGEQLKDSEEEGTRHFMVNIIEPQFNLHSEEANGRFLLAAVSGRVLARSFHSILDVGYEMIEKAVGTKNSNIPNCEPKMMWKRMELSAMLEHVQAHVAPTDIDPGAGVQWLPRIRRSSPKVKRTGALLERVFMPCDMYFRYTRHKGGTPELKVKPLKELTFNSHNIVMTMTSHQFRVMMDVLTNLLATRMPKSRKSSLSFLAEDDDDYIEEEADQMVPVGVEEVELAKVNLEQKEWELKLVFKDISELSFGTESLSDFYPEKEGDMWMIACGKSLLVQGLKRELLNAKKSRKAAYASLRTALLKAAEIRLMEREKNKRPSHAMRVSLKITKVIWSMLLDGKSFAEAEINEMVSV 2112
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10601436 10612537 + Conep04aG0133400.1 Cone4ag1288 436266

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1288 2112 Coils Coil 1749 1769 - -
Cone4ag1288 2112 MobiDBLite consensus disorder prediction 1748 1769 - -
Cone4ag1288 2112 SMART Fmp27_GFWDK_2 1165 1313 IPR019441 -
Cone4ag1288 2112 MobiDBLite consensus disorder prediction 1666 1685 - -
Cone4ag1288 2112 MobiDBLite consensus disorder prediction 798 825 - -
Cone4ag1288 2112 PANTHER ANTIGEN MLAA-22-RELATED 1752 2109 IPR045167 -
Cone4ag1288 2112 MobiDBLite consensus disorder prediction 270 294 - -
Cone4ag1288 2112 Pfam BLTP2/FMP27/Hobbit, C-terminal 1889 2109 IPR019443 -
Cone4ag1288 2112 MobiDBLite consensus disorder prediction 109 129 - -
Cone4ag1288 2112 MobiDBLite consensus disorder prediction 1666 1688 - -
Cone4ag1288 2112 MobiDBLite consensus disorder prediction 1726 1769 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1288 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1185 Cone-Chr17:8679341 Cone4ag1288 Cone-Chr4:10601436 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g533 . . . . . . . . . . . . . Car12g00189 Sed04g0198 . Cpe07g00177 Bhi04g01397 Tan02g2458 Cmetu03g1114 . Hepe10g0440 . Lcy13g1490 . . . . . . . Cone4ag1288 . . . . . . . . . . . . . . Bma02g00117 . . . Cma12g00209 . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008543 1 1 0 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 0 1 1 2 1 1 34