Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag1300 | ATGTTCCCAAAGTTCCATCCCCACCACCATCACCACAACCCATTTTCCATAACCCCTCAAGTAGGAGGTGGCGACGGCGACGGCGACGGGGTGAGTCCCATCTTGAGCCAGAAACAGCCCAAACAGTCAGCTGAGCCCAATTCCAGAGACGGAGCCAGCATCGAGGTTTCTAGGCGCCCACGTGGCCGCCCACCGGGCTCAAAAAACAAGCCCAAATCACCCATCATCTTAACGGCTCACGAGCCGGAGCCTCCCCCTCTGAGGCCATATGTCATCGAGGTCTGTGCAGGAAACGACGTCGTCAAGTCCGTCGCTCACTTCTGTCGCCGCAAAAACTTTGCACTGTGTGTCCTAACCGGCTCCGGAACGGTCGCTAACGTCAGTCTCCGACAACCCTCCGCAACTCCCAGAGCGACGGTTACCTTCCACGGACGCTTCGAAATCCTCTCTCTAAACGCTACGTTTTTTCCCCAAACGCCGTCGTATCCAACAGTACTCCCTAACAGCTTCACCATCTCTCTGGCGGGCCCTCAGGGCCAGATCGTCGGCGGTCTAGTCACCGGATCTTTGATCGCAGCTGGAACTGTTTACTTGATCGCTGCCTCGTTCAATAACCCTTCTTATCACCGCCTACCTCCAGACGAGGAGGTCCAGAAGTCGGAATCGGGATGCTACAGCGGAGGCGGTGGCGCTGAGGGTCAGTCTCTACCGGCTACCGGCGCAGAAGAAGGTCAAGGTTCAGAGTTGTACGGTTGTCATGCACCGTCGGATGTAATATGGGCTCCGACGGCGAGACAACCACCACCTCCTCCTCCTCCTCCTCCTCACCATTACTGA | 837 | 57.11 | MFPKFHPHHHHHNPFSITPQVGGGDGDGDGVSPILSQKQPKQSAEPNSRDGASIEVSRRPRGRPPGSKNKPKSPIILTAHEPEPPPLRPYVIEVCAGNDVVKSVAHFCRRKNFALCVLTGSGTVANVSLRQPSATPRATVTFHGRFEILSLNATFFPQTPSYPTVLPNSFTISLAGPQGQIVGGLVTGSLIAAGTVYLIAASFNNPSYHRLPPDEEVQKSESGCYSGGGGAEGQSLPATGAEEGQGSELYGCHAPSDVIWAPTARQPPPPPPPPPHHY | 278 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 10726530 | 10727473 | - | Conep04aG0134600.1 | Cone4ag1300 | 436278 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag1300 | 278 | MobiDBLite | consensus disorder prediction | 262 | 278 | - | - | |
Cone4ag1300 | 278 | CDD | DUF296 | 88 | 203 | IPR005175 | - | |
Cone4ag1300 | 278 | MobiDBLite | consensus disorder prediction | 35 | 50 | - | - | |
Cone4ag1300 | 278 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 42 | 244 | IPR014476 | GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cone4ag1300 | 278 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 88 | 204 | IPR005175 | - | |
Cone4ag1300 | 278 | Gene3D | - | 87 | 223 | - | - | |
Cone4ag1300 | 278 | ProSiteProfiles | PPC domain profile profile. | 84 | 224 | IPR005175 | - | |
Cone4ag1300 | 278 | FunFam | AT-hook motif nuclear-localized protein | 88 | 222 | - | - | |
Cone4ag1300 | 278 | MobiDBLite | consensus disorder prediction | 210 | 278 | - | - | |
Cone4ag1300 | 278 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 86 | 215 | - | - | |
Cone4ag1300 | 278 | MobiDBLite | consensus disorder prediction | 1 | 82 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone20ag0558 | Cone-Chr20:3120524 | Cone4ag1300 | Cone-Chr4:10726530 | 4.00E-89 | dispersed | |
Cone4ag1300 | Cone-Chr4:10726530 | Cone7ag0452 | Cone-Chr7:2047086 | 4.20E-48 | dispersed | |
Cone14ag0141 | Cone-Chr14:683830 | Cone4ag1300 | Cone-Chr4:10726530 | 4.86E-45 | wgd | |
Cone17ag1172 | Cone-Chr17:8610336 | Cone4ag1300 | Cone-Chr4:10726530 | 3.25E-89 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag1300 | - | - | - | 0.0 |