Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1307 ATGTACAGAGAAATGGCGTCCACAGTCCCCGAAAACCTAACCAGACAACAGTACTTATACCTAGCGAAGCTTGCCGAGCAAGCCGAGCGGTATGAGGAGATGGTTCAGTTTATGCAGAAGCTGGTCCTCGGCTCGACTCCCGCGTCGGAGCTTACTGTCGAGGAGCGTAACCTTCTCTCCGTGGCCTATAAGAACGTGATCGGCTCGCTCCGTGCGGCTTGGCGTATCGTATCTTCAATTGAGCAGAAGGAGGAGGGAAGGAAGAACGAAGAGCATGTGGTACTGGTTAAGGAGTACAGATCCAAGGTTGAGTCTGAATTATCTGATATCTGTGCGAGTATTTTGAAGTTGCTGGACTCGAATCTGATAGCTTCTGCTGCAGCCAGTGAGTCGAAGGTATTCTATTTGAAGATGAAGGGGGATTACCATAGGTATATGGCTGAGTTTAAGGTTGGAGACGAGAGGAAAGTTGCTGCAGAGGATACTATGCTCTCTTACAAGGCTGCTCAGGATGTTGCGCTTGCGGATCTGGCACCAACGCATCCTATTAGGCTGGGGCTGGCTCTCAATTTCTCTGTGTTTTACTTTGAGATTCTGAATCAATCTGACAAAGCATGCAGCATGGCCAAACAGGCATTTGAAGAAGCCATAGCTGAGCTAGACACCTTAGGTGAAGAATCATACAAGGACAGCACTCTTATCATGCAACTTCTAAGGGACAACCTCACTCTCTGGACTTCAGACATGCAGGACCAGTTGGATGAGCCATAG 771 48.64 MYREMASTVPENLTRQQYLYLAKLAEQAERYEEMVQFMQKLVLGSTPASELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVVLVKEYRSKVESELSDICASILKLLDSNLIASAAASESKVFYLKMKGDYHRYMAEFKVGDERKVAAEDTMLSYKAAQDVALADLAPTHPIRLGLALNFSVFYFEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDQLDEP 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10760468 10763403 + Conep04aG0135300.1 Cone4ag1307 436285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1307 256 Gene3D - 2 255 IPR036815 -
Cone4ag1307 256 PRINTS 14-3-3 protein zeta signature 165 191 IPR000308 -
Cone4ag1307 256 PRINTS 14-3-3 protein zeta signature 50 79 IPR000308 -
Cone4ag1307 256 PRINTS 14-3-3 protein zeta signature 219 248 IPR000308 -
Cone4ag1307 256 PRINTS 14-3-3 protein zeta signature 130 152 IPR000308 -
Cone4ag1307 256 PRINTS 14-3-3 protein zeta signature 99 123 IPR000308 -
Cone4ag1307 256 PRINTS 14-3-3 protein zeta signature 192 218 IPR000308 -
Cone4ag1307 256 SUPERFAMILY 14-3-3 protein 14 248 IPR036815 -
Cone4ag1307 256 Pfam 14-3-3 protein 21 246 IPR023410 -
Cone4ag1307 256 PIRSF 14-3-3 10 255 IPR000308 -
Cone4ag1307 256 SMART 1433_4 15 255 IPR023410 -
Cone4ag1307 256 PANTHER 14-3-3 PROTEIN 15 251 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cone4ag1307 256 Coils Coil 21 41 - -
Cone4ag1307 256 FunFam 14-3-3 gamma 1 12 255 - -
Cone4ag1307 256 ProSitePatterns 14-3-3 proteins signature 2. 228 247 IPR023409 -
Cone4ag1307 256 ProSitePatterns 14-3-3 proteins signature 1. 56 66 IPR023409 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0218 Cone-Chr12:1123185 Cone4ag1307 Cone-Chr4:10760468 4.71E-150 dispersed
Cone4ag1307 Cone-Chr4:10760468 Cone7ag1266 Cone-Chr7:9413986 4.64E-124 dispersed
Cone4ag1307 Cone-Chr4:10760468 Cone7ag0849 Cone-Chr7:6466251 8.33E-169 wgd
Cone4ag1307 Cone-Chr4:10760468 Cone8ag0206 Cone-Chr8:1113875 6.47E-148 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1307 K06630 - rcu:8268390 461.07