Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1319 ATGAGCATGATAACCTCATCCTATGGGGATCACTGGCGGAACCGACGTCGCATCAGTATGACCGATGTTTTCTCATCAACCCGACTAAACTCCTTCTCCGGGATTAGAAGAGACGAAGTGAATCGCTTACTGAAGAAACTGTCTAAAAACTCATTACATGAATTTTCGAAAGTTGAGCTTCAATCCATGGAAGAGGCTTCGAGACGGCAAGTCGGACGAGGAAGAGGTGATGAGATTTCAGGAGATGCGAAGGAGTTAACAGAAACTGTTGGCGCGGCAAATCCGGGTGACTACTTACCCTTTCTGGACTGGATTACCCTGAATGCTCGCGAGAAGAAGATGATAAGGCATGCTAAAAGGATTGATGCGTTCCTACAAGGATTGATTGATGAACATCGTAGTAAGAAGGAAGATGGTCGAAATACTATGATTGATCATCTCCTGTCTTTGCAAGAATCCCAACATGATTTTTATAGCGACGAAATAATTAAAGGGCTTATAAATGTAAGGACCGAGACATCATCAGAAACATTAGAATGGGCGCTGTCTAATCTACTCAACCATCCTGAGACATTAAAGAAGGCTAGAGATGAGTTGGAGTCTCAAATCGGACAAGAAGAACTGCTAAACGAAGCTGACGTGTCAAAGCTGCCGTACCTTAATGGAATAGTCGCTGAAACGCTTCGGTTGTATCCTGCAGCCCCCTTGCTGCTGCCTCATATCAGTTCTGATAATTGCAGAGTCGGAGGATACAACGTGCCACGTGACACAATAGTAATAGCCAATGTGTGGGCCATACATAGGGAACCTAATCTTTGGGATGAGCCTACAAGTTTTAAGCCTGAAAGACACAAAGAGGGTAGTGGTAGTGGCAGTGATAGTGACACGAGGGCTTGTCCTGGAGCTGGCTTGGCCCAAAGGGTCTTGGGTCTGAGCGTGGGATCCTTGATCCAATGCTTTGAGTGGGACAGGATAAGTAAGAAGGAAATTGACATGGATGAGGACTGA 1008 45.44 MSMITSSYGDHWRNRRRISMTDVFSSTRLNSFSGIRRDEVNRLLKKLSKNSLHEFSKVELQSMEEASRRQVGRGRGDEISGDAKELTETVGAANPGDYLPFLDWITLNAREKKMIRHAKRIDAFLQGLIDEHRSKKEDGRNTMIDHLLSLQESQHDFYSDEIIKGLINVRTETSSETLEWALSNLLNHPETLKKARDELESQIGQEELLNEADVSKLPYLNGIVAETLRLYPAAPLLLPHISSDNCRVGGYNVPRDTIVIANVWAIHREPNLWDEPTSFKPERHKEGSGSGSDSDTRACPGAGLAQRVLGLSVGSLIQCFEWDRISKKEIDMDED 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10826379 10827624 - Conep04aG0136500.1 Cone4ag1319 436297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1319 335 MobiDBLite consensus disorder prediction 275 298 - -
Cone4ag1319 335 Pfam Cytochrome P450 6 331 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1319 335 SUPERFAMILY Cytochrome P450 3 334 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1319 335 Gene3D Cytochrome P450 1 335 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1319 335 PRINTS E-class P450 group I signature 262 286 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1319 335 PRINTS E-class P450 group I signature 221 239 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1319 335 PRINTS E-class P450 group I signature 178 204 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1319 335 MobiDBLite consensus disorder prediction 275 291 - -
Cone4ag1319 335 Coils Coil 192 212 - -
Cone4ag1319 335 PRINTS P450 superfamily signature 299 310 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1319 335 PRINTS P450 superfamily signature 222 233 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1319 335 PRINTS P450 superfamily signature 169 186 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1319 335 PANTHER CYTOCHROME P450 82C3-RELATED 3 334 IPR050651 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1319 Cone-Chr4:10826379 Cone6ag1427 Cone-Chr6:11441685 1.77E-134 dispersed
Cone4ag1319 Cone-Chr4:10826379 Cone7ag1261 Cone-Chr7:9368226 4.02E-181 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1319 K13260 - mdm:103401458 381.719