Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1325 ATGGCCGTCGCTCCTTCAGCTCGCGAAGAGAACGTGTACATGGCCAAGCTCGCCGAGCAAGCTGAGCGCTACGAAGAGATGGTGGAGTTCATGGAGAAGGTCTCAGCCGCCGTCGAGAAGGAGGAACTCTCCGTCGAGGAGAGAAACCTCCTCTCCGTTGCCTATAAGAATGTGATAGGCGCTCGGAGGGCCTCTTGGCGTATCATCTCCTCCATCGAGCAGAAGGAGGAGAGCCGTGGAAATGATGACCACGTCTCCGTGATCCGTGACTACAGATCTAAGATCGAGAACGAGCTCTCTAACATCTGTGACGGGATCCTCAAGCTCCTTGACTCCCGGCTCATTCCCTCGGCTTCGTCTGGAGATTCCAAGGTTTTTTACCTGAAGATGAAGGGCGATTACCATAGGTACCTTGCTGAGTTTAAGACCGGAGCTGAGCGAAAGGAGGCCGCTGAGAGCACCCTCAATGCTTACAAATCAGCTCAGGATATCGCAACTTCCGACCTTGCTCCCACCCATCCCATCAGACTTGGATTGGCTCTGAACTTCTCTGTGTTTTACTATGAGATTCTGAACTCTCCTGACCGAGCCTGCAACCTTGCAAAACAGGCTTTTGATGAAGCTATTGCTGAATTGGACACTCTGGGCGAGGAATCGTACAAGGATAGCACTTTGATCATGCAGCTTCTTCGTGATAACCTCACACTGTGGACCTCTGATATGCAGGATGATGGAGCAGATGAAATTAAAGAAGCTCCCAAAACTGAGGAAGAACAGAAGTGA 783 51.21 MAVAPSAREENVYMAKLAEQAERYEEMVEFMEKVSAAVEKEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIRDYRSKIENELSNICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLNAYKSAQDIATSDLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPKTEEEQK 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10869838 10871914 - Conep04aG0137100.1 Cone4ag1325 436303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1325 260 PIRSF 14-3-3 2 250 IPR000308 -
Cone4ag1325 260 Gene3D - 2 251 IPR036815 -
Cone4ag1325 260 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Cone4ag1325 260 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Cone4ag1325 260 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Cone4ag1325 260 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Cone4ag1325 260 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Cone4ag1325 260 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Cone4ag1325 260 Pfam 14-3-3 protein 14 238 IPR023410 -
Cone4ag1325 260 PANTHER 14-3-3 PROTEIN 8 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cone4ag1325 260 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Cone4ag1325 260 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Cone4ag1325 260 Coils Coil 14 41 - -
Cone4ag1325 260 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Cone4ag1325 260 SMART 1433_4 8 251 IPR023410 -
Cone4ag1325 260 FunFam 14-3-3 protein epsilon 3 251 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag1440 Cone-Chr3:33138335 Cone4ag1325 Cone-Chr4:10869838 5.29E-115 dispersed
Cone4ag1325 Cone-Chr4:10869838 Cone8ag0206 Cone-Chr8:1113875 7.00E-123 dispersed
Cone17ag1206 Cone-Chr17:8795615 Cone4ag1325 Cone-Chr4:10869838 6.90E-162 wgd
Cone20ag0521 Cone-Chr20:2823921 Cone4ag1325 Cone-Chr4:10869838 5.69E-163 wgd
Cone4ag1325 Cone-Chr4:10869838 Cone7ag1266 Cone-Chr7:9413986 4.98E-173 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1325 K06630 - vvi:100257548 476.092