Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag1335 | ATGGATTGGTTGGGCTGCTTTCGTAGTTCTCAATCCAAGCTTGTGAGGGTAGAATCCGAGTCTAGCTCAGGTAAGGGAAGAAGCCATGAAGGGTTAATCAAGTATGGTTTCAGCCTAGTAAAAGGGAGAGCAGATCATCCCATGGAGGATTATCACGTTTCTAAGTTTGTTCAGATTCAAGAAAATGAGGTAGGGCTCTTTGCTATTTTTGACGGTCATCTTGGAGACACCGTCGCTGCCTATCTACAAAAGCATTTGTTCTCTAACATCCTAAAGGAGGAAGAGTTTTGGGGGGACCCCCCGAGAGCTATATCTAAAGCCTACGAGAAGACAGACCAGGCAATTCTCTCACAGAGTGCTGACTTGGGGCGAGGTGGGTCCACTGCTGTTACGGCTATTTTGATCAATGGTCAGAGGCTATATGTAGCCAATGTTGGAGATTCAAGAGCTGTTATTTCAAGGCGTGGTCAAGCAGAGCAAATGACCATTGACCATGAGCCCAACACAGAACGAGGCACCATTGAGAACAAAGGCGGCTTTGTCTCAAACTTGCCAGGAGATGTCCCTAGAGTTAATGGGCAGTTGGCCGTTTCTCGTGCTTTTGGAGACAAGAGCCTCAAATTACATTTGCGATCTGATCCCGACATACAGAATACTGATATTGATGGTCATACTGATATACTAATCCTTGCCAGCGATGGCGTTTGGAAGGTAATGAAGAATCAAGAGGCGATTGATATTGCAAGAGGGATCAAAGATCCATTAAAGGCTGCTAAGCAATTAACAGCTGCAGCATTGAGGAAAGCAAGCAAAGATGATATATCTTGTGTTGTGGTTAGATTTAGGTGA | 849 | 44.99 | MDWLGCFRSSQSKLVRVESESSSGKGRSHEGLIKYGFSLVKGRADHPMEDYHVSKFVQIQENEVGLFAIFDGHLGDTVAAYLQKHLFSNILKEEEFWGDPPRAISKAYEKTDQAILSQSADLGRGGSTAVTAILINGQRLYVANVGDSRAVISRRGQAEQMTIDHEPNTERGTIENKGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKLHLRSDPDIQNTDIDGHTDILILASDGVWKVMKNQEAIDIARGIKDPLKAAKQLTAAALRKASKDDISCVVVRFR | 282 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 10921634 | 10924011 | - | Conep04aG0138300.1 | Cone4ag1335 | 436313 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag1335 | 282 | CDD | PP2Cc | 33 | 281 | IPR001932 | - | |
Cone4ag1335 | 282 | SMART | PP2C_SIG_2 | 45 | 281 | IPR001932 | - | |
Cone4ag1335 | 282 | FunFam | Probable protein phosphatase 2C 39 | 24 | 282 | - | - | |
Cone4ag1335 | 282 | ProSiteProfiles | PPM-type phosphatase domain profile. | 34 | 281 | IPR001932 | - | |
Cone4ag1335 | 282 | SMART | PP2C_4 | 30 | 279 | IPR001932 | - | |
Cone4ag1335 | 282 | Pfam | Protein phosphatase 2C | 43 | 274 | IPR001932 | - | |
Cone4ag1335 | 282 | Gene3D | - | 29 | 282 | IPR036457 | - | |
Cone4ag1335 | 282 | PANTHER | PROTEIN PHOSPHATASE | 26 | 279 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cone4ag1335 | 282 | SUPERFAMILY | PP2C-like | 31 | 281 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0938 | Cone-Chr10:4906845 | Cone4ag1335 | Cone-Chr4:10921634 | 5.28E-147 | dispersed | |
Cone3ag1093 | Cone-Chr3:29567925 | Cone4ag1335 | Cone-Chr4:10921634 | 9.15E-148 | dispersed | |
Cone4ag1335 | Cone-Chr4:10921634 | Cone8ag1519 | Cone-Chr8:11461738 | 2.61E-111 | dispersed | |
Cone17ag1218 | Cone-Chr17:8842993 | Cone4ag1335 | Cone-Chr4:10921634 | 9.68E-144 | wgd | |
Cone20ag0507 | Cone-Chr20:2741321 | Cone4ag1335 | Cone-Chr4:10921634 | 8.43E-129 | wgd | |
Cone4ag1335 | Cone-Chr4:10921634 | Cone7ag1594 | Cone-Chr7:10900747 | 3.92E-183 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag1335 | K17506 | - | rcu:8281649 | 455.292 |