Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1369 ATGGGTTCGATAGACACACCGGCGGGTGAAGAGAACGGCTCTGCAACCACGAAACGCGATGGGGAACGAAAGCCTTCTACCGGTGACGGTGTAACTCTTTCTTCTGGAGAAACGACCGTAACGAGGCCAGATAAGCCGTCGGAGTCCCACGCCACGAAGAAGCGTAAGGCCAGTATGCTTCCCCTTGAGGTCGGTACTCGCGTCTTGTGCCGTTGGAGGGACGGAAAATTTCACCCGGCCAAGGTCATCGAGCGCCGCAAAATTTTCGTCGACAATCCCAATGATTACGAGTATTACGTCCACTACACTGAGTTCAATAGGAGGCTTGATGAATGGATTAAGCTGGACCAACTTGATCTTGATTCAGTTGAGACTGTTGTTGATGAGAAAGTGGAAGAGAAGGTACAGAGCTTGAAAATGACGCGTCACCAAAAGAGGAAGATAGACGAGACGCATGTAGAGGGTCATGAGGAACTCGATCCTGCCAGCCTACGAGAGCATGAGGAATTCACAAAAGTGAAAAATATAGCAGCTATAGAATATGGAAGATATGAAATTGAAACATGGTACTTCTCTCCGTTTCCACCAGAATACAATGACTGTATAAAGCTGTTCTTTTGTGAGTTCTGTCTCAATTTCATGAAGCGAAAAGAGCAACTTCAAAGGCATATGAGGAAGTGCGATCTGAAGCATCCTCCTGGTGATGAGATATACAGAAGCGAGACACTGTCAATGTTTGAGGTTGATGGAAAGAAGAACAAAGTTTATGCGCAGAATCTCTGTTACCTGGCAAAATTGTTTCTGGATCATAAGACCTTATATTATGATGTTGACCTTTTTCTGTTTTATGTTCTTTGTGAATGTGATGATCAGGGATGCCACATGGTTGGATATTTTTCCAAGGAAAAGCATTCAGAGGAATCCTACAATTTGGCTTGCATCCTCACCCTTCCTCCTTATCAGAGAAAAGGATATGGCAAGTTCTTAATTGCCTTTTCTTATGAACTTTCCAAGAAAGAAGGTAAGGCTGGCACGCCGGAAAGACCCCTTTCTGACCTTGGAATGTTGAGCTACAAAGGATACTGGACCCGGGTTCTTCTAGACATATTGAAGAAGCACAAGGGCAATATTTCCATCAAGGAGCTGAGTGACATGACAGCAATCAAGGCAGATGATATATTAAACACCCTTCAGGGCTTAGAATTGATTCAGTACAGAAAAGGGCAGCATGTTATCTCTGCCGATCCAAAAGTCTTGGATCGTCATCTAAAAGCTGCTGGTCGGGGCAGTCTCGAGGTTGATGCTAGCAAATTGATCTGGACTCCTTGTAAGGAACAAAGCTAA 1344 44.64 MGSIDTPAGEENGSATTKRDGERKPSTGDGVTLSSGETTVTRPDKPSESHATKKRKASMLPLEVGTRVLCRWRDGKFHPAKVIERRKIFVDNPNDYEYYVHYTEFNRRLDEWIKLDQLDLDSVETVVDEKVEEKVQSLKMTRHQKRKIDETHVEGHEELDPASLREHEEFTKVKNIAAIEYGRYEIETWYFSPFPPEYNDCIKLFFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSETLSMFEVDGKKNKVYAQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDQGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKAGTPERPLSDLGMLSYKGYWTRVLLDILKKHKGNISIKELSDMTAIKADDILNTLQGLELIQYRKGQHVISADPKVLDRHLKAAGRGSLEVDASKLIWTPCKEQS 447
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 11120228 11123840 - Conep04aG0141800.1 Cone4ag1369 436347
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1369 447 CDD CBD_MOF_like 65 134 - -
Cone4ag1369 447 SMART chromo_7 76 135 IPR000953 -
Cone4ag1369 447 MobiDBLite consensus disorder prediction 1 58 - -
Cone4ag1369 447 FunFam Histone acetyltransferase 170 227 - -
Cone4ag1369 447 Pfam RNA binding activity-knot of a chromodomain 62 120 IPR025995 -
Cone4ag1369 447 MobiDBLite consensus disorder prediction 43 57 - -
Cone4ag1369 447 CDD NAT_SF 283 341 - -
Cone4ag1369 447 Gene3D - 350 430 IPR036388 -
Cone4ag1369 447 Pfam MYST family zinc finger domain 173 227 IPR040706 -
Cone4ag1369 447 FunFam Histone acetyltransferase 230 359 - -
Cone4ag1369 447 FunFam Histone acetyltransferase 52 171 - -
Cone4ag1369 447 Gene3D - 230 442 - -
Cone4ag1369 447 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 172 442 IPR016181 -
Cone4ag1369 447 Gene3D - 172 228 - -
Cone4ag1369 447 SUPERFAMILY Chromo domain-like 54 172 IPR016197 -
Cone4ag1369 447 FunFam Histone acetyltransferase 350 430 - -
Cone4ag1369 447 Pfam MOZ/SAS family 232 409 IPR002717 GO:0004402(InterPro)|GO:0006355(InterPro)
Cone4ag1369 447 PANTHER HISTONE ACETYLTRANSFERASE 34 444 IPR050603 GO:0000790(PANTHER)|GO:0003712(PANTHER)|GO:0045892(PANTHER)|GO:0045944(PANTHER)
Cone4ag1369 447 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 171 442 IPR002717 GO:0004402(InterPro)|GO:0006355(InterPro)
Cone4ag1369 447 Gene3D - 49 171 - -
Cone4ag1369 447 MobiDBLite consensus disorder prediction 28 42 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1257 Cone-Chr17:9051917 Cone4ag1369 Cone-Chr4:11120228 3.49E-269 wgd
Cone20ag0470 Cone-Chr20:2477098 Cone4ag1369 Cone-Chr4:11120228 2.19E-270 wgd
Cone4ag1369 Cone-Chr4:11120228 Cone7ag1562 Cone-Chr7:10733882 2.14E-73 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1369 K11308 - cit:102608219 782.326