Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag1372 | ATGCATCATCTACCACAGATTTTCACTCATGTCCGGCGGTCTAAACGCATCGATCCGAGAAGCAAAGGAAAACCGAGGCTTGAGCGTCGGAATGCTCTGAGGAACATAGATTATGACGCCGGGTCTTCCTCTTCGACGCTGGATTCACCGGAAACCCCGCACACTCGATCGCTTGAGCTGTTGAGCCAAACGAGCTTTCGGATCGAAGGAACTGAGGGCGAGTTTGATCGGCTATGTCGGAGTTTGGGCCTCTCAGGTCCCGATGACTTTGCTATTCCAACGGTGACGTGGGAGGCTAGGAAGGCCCGGTCGTCTTCGGATCGTGTAGCGAGAGCCAACTTGCTGGATAGTCTGACGGGCAAGGAAGAGGAGGACAAGGTGGAGGAAGAAGTTGAAGCTGGATTGTGTGCGAGGATTGTGGATTCTGTTATAATTGGGGATTTGACTGAGTTGACTCGGAATCAACAGGCCAAGACGAGTGAGAGTTATAGTGGTAGTGAAGGGGGAGGAGGTGGAATCAAAGGTGTTCGACCGCCGGTGCTTAAACCGCCGCCGAGTATGCGTATTCCGGTGATTGATTGTAAGAGTTCAACTTGGGACATTTGCTGGAATTTCGGTCCGGATGATGAAATACGGCCTTCACAGGGGGTCCAAGGTCGGAATAGTTCTTATTCTGAAGATGGTGATGACAGAGAAGAAGCTTTCGTACCAGCTTTCAAGGGTGAAGTCGAGCGGAATCTGGTTGGGCTTCGGAAGAGTGCTGCATTTTTGGAGTCTCCTTGTTGTTCCTTTACAACTTCAAACGATGATGATTCTTCGAGCACTACCACGGAGCCTCCGTCCAGTATTTCACCAAGTGGGAGGTTGAAGGGCACCATCACGTCCTGGGAAAAGGGTCAGCTCCTTGGCCGCGGTTCGTTTGGATCAGTATACGAAGGAATTTCTGATGGTGGAGTTTTCTTCGCCATCAAGGAAGTTTCATTGCTCGATCAAGATAGCCAAGGAAGGCAAAGTATTTCTCAGCTTGAGCAGGAGATTGCTCTTCTAAGTCGGTTTAAGCACGAGAACATAGTCAGGTATCATGGCACAGCTAAGGATGAATCAAAACTCTATATCTTTCTTGAGCTTGTAACCCAAGGGTCCCTCATGAGTCTCTATCAGAAGTATCATCTTCGGGATACCCAAGTCTCCGCTTACACAAGACAGATTCTTCATGGCTTGAAGTATCTTCATGACCAAAATATAATTCACAGGGACATCAAATGTGCAAATATTTTGGTGGATGCAAATGGATTAGTGAAGCTTGCAGATTTTGGATTGGCAAAGGCAACAAAGCTGAATGATGTTAAATCTTGTAAGGGGACTGCATTCTGGATGGCACCGGAGGTTGTTAATAGGAGGAGTCAAGGGTATGGTCTTCCAGCTGATATCTGGAGCCTTGGCTGCACAGTGTTGGAGATGTTGACCCGTCAGATTCCATATGCTGAGTGGGAATGTATGACGGCAATATATAAGATCGGACAGGGTGTGCTTCCTCATGTTCCCGATTCTCTCTCAGTAGATGCACGGGATTTCATTCGGAAGTGCCTACGAGTTAATCCAAGTGACCGCCCCACTGCTGCTCGACTATTAAACCATCCATTTGTGAAGATTCCACTTCCCACTAACTCAGGCTCAGCATCTCCTTTCAATCATGGCAGAAGGCATTAG | 1710 | 48.25 | MHHLPQIFTHVRRSKRIDPRSKGKPRLERRNALRNIDYDAGSSSSTLDSPETPHTRSLELLSQTSFRIEGTEGEFDRLCRSLGLSGPDDFAIPTVTWEARKARSSSDRVARANLLDSLTGKEEEDKVEEEVEAGLCARIVDSVIIGDLTELTRNQQAKTSESYSGSEGGGGGIKGVRPPVLKPPPSMRIPVIDCKSSTWDICWNFGPDDEIRPSQGVQGRNSSYSEDGDDREEAFVPAFKGEVERNLVGLRKSAAFLESPCCSFTTSNDDDSSSTTTEPPSSISPSGRLKGTITSWEKGQLLGRGSFGSVYEGISDGGVFFAIKEVSLLDQDSQGRQSISQLEQEIALLSRFKHENIVRYHGTAKDESKLYIFLELVTQGSLMSLYQKYHLRDTQVSAYTRQILHGLKYLHDQNIIHRDIKCANILVDANGLVKLADFGLAKATKLNDVKSCKGTAFWMAPEVVNRRSQGYGLPADIWSLGCTVLEMLTRQIPYAEWECMTAIYKIGQGVLPHVPDSLSVDARDFIRKCLRVNPSDRPTAARLLNHPFVKIPLPTNSGSASPFNHGRRH | 569 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 11134160 | 11138778 | + | Conep04aG0142100.1 | Cone4ag1372 | 436350 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag1372 | 569 | MobiDBLite | consensus disorder prediction | 155 | 188 | - | - | |
Cone4ag1372 | 569 | SUPERFAMILY | Protein kinase-like (PK-like) | 295 | 550 | IPR011009 | - | |
Cone4ag1372 | 569 | ProSitePatterns | Protein kinases ATP-binding region signature. | 302 | 324 | IPR017441 | GO:0005524(InterPro) | |
Cone4ag1372 | 569 | Gene3D | Transferase(Phosphotransferase) domain 1 | 293 | 562 | - | - | |
Cone4ag1372 | 569 | MobiDBLite | consensus disorder prediction | 210 | 231 | - | - | |
Cone4ag1372 | 569 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 15 | 550 | IPR050538 | - | |
Cone4ag1372 | 569 | SMART | serkin_6 | 296 | 549 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag1372 | 569 | MobiDBLite | consensus disorder prediction | 265 | 291 | - | - | |
Cone4ag1372 | 569 | Pfam | Protein kinase domain | 297 | 549 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag1372 | 569 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 415 | 427 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone4ag1372 | 569 | FunFam | Mitogen-activated protein kinase 1, putative, expressed | 294 | 561 | - | - | |
Cone4ag1372 | 569 | ProSiteProfiles | Protein kinase domain profile. | 296 | 549 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag1372 | Cone-Chr4:11134160 | Cone8ag0976 | Cone-Chr8:9169745 | 3.70E-170 | dispersed | |
Cone7ag1553 | Cone-Chr7:10688013 | Cone4ag1372 | Cone-Chr4:11134160 | 6.31E-20 | dispersed | |
Cone4ag1372 | Cone-Chr4:11134160 | Cone4ag1378 | Cone-Chr4:11174201 | 4.09E-10 | proximal | |
Cone17ag1261 | Cone-Chr17:9077026 | Cone4ag1372 | Cone-Chr4:11134160 | 2.22E-181 | wgd | |
Cone20ag0467 | Cone-Chr20:2449845 | Cone4ag1372 | Cone-Chr4:11134160 | 1.76E-177 | wgd | |
Cone4ag1372 | Cone-Chr4:11134160 | Cone6ag1606 | Cone-Chr6:12440854 | 2.21E-26 | wgd | |
Cone4ag1372 | Cone-Chr4:11134160 | Cone7ag1559 | Cone-Chr7:10715928 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82787 | PF10699 | HAP2-GCS1 | 2.00E-133 | No_clan | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag1372 | K13414 | - | rcu:8274146 | 677.167 |