Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1395 ATGGGAGGAGAAACATCATTTGATATGTTGCGAGAAGTAGTGACGAAAATGAAGCCATACATAGCAATGGTGTCGATGCAGTTTGGATATGCAGGCATGTACATCATCACCATGGTTTCATTGAAGCATGGTATGAGTCATTACATACTTGCTGTCTACCGACATGTCGTCGCCACCGTCGTCATCGCACCCTTTGCTCTTGTCCTCGAAAGGAAAATAAGGCCCAAGATGACTCTCCCCATCTTCCTCAGAATCATGGTGCTCGGTTTTCTAGAGCCGGTGCTGGATCAGAATCTATACTACTTAGGAATGAAGTATACCTCTGCAACATTTGCATCTGCCGTTGTCAATGTTCTCCCTGCCATTACCTTCATCATGGCTATCATTTTCAGGCTGGAGATGATAGACTTAAAGAAAATACATAGCATAGCAAAGATTGTGGGAACCACAGTGACAGTGTCGGGAGCAATGGTGATGACTCTATACAAAGGACCGATTCTTAACATATTTGGGGCCAATAGGACGGCCTACCATGGCACTGGCAGCAACAATGAATCATCTGATCAGCATTGGATCACTGGGACTCTCTTCCTCATCTGCAGTTGCTGTGGTTGGTCTGCTTTCTTCATTTTGCAATCATTCACGTTGAAGAAATACCCAGCAGAGCTGTCACTGACAGCTTTGATATGCTTTACGGGAATGATAGAAGGTTCGATTGTGTCCCTTCTTATGGAACGAGACATGAGTGTTTGGGCTATCGGATGGGATTCTAGGCTACTTGCTGCTGCTTACTCTGGGATAGTTTGCTCTGGAATAGCTTATTATGTGCAAGGTGTTGTTATCAGAGTTAGAGGCCCTGTTTTCGTCACATCTTTTAGCCCTCTTTGCATGATTATCACTGCCGCACTAGGATCTATTGTCTTGGCTGAGAAAATCCACCTCGGAAGCGTGATTGGAGCAGTTGTGATAGTGTCTGGCCTGTACACAGTGGTGTGGGGTAAAACCAAAGATCATCTCATCAGCTCAACGGCGTCATTGACCAATGAGAAAACTGGTCTGCAAGAGTTGCCGATCACATCCGTTAATGCCACCAAAATCAACGGACATGATGAGATTTCTAAGGCTCCTCCCACTTAG 1137 45.29 MGGETSFDMLREVVTKMKPYIAMVSMQFGYAGMYIITMVSLKHGMSHYILAVYRHVVATVVIAPFALVLERKIRPKMTLPIFLRIMVLGFLEPVLDQNLYYLGMKYTSATFASAVVNVLPAITFIMAIIFRLEMIDLKKIHSIAKIVGTTVTVSGAMVMTLYKGPILNIFGANRTAYHGTGSNNESSDQHWITGTLFLICSCCGWSAFFILQSFTLKKYPAELSLTALICFTGMIEGSIVSLLMERDMSVWAIGWDSRLLAAAYSGIVCSGIAYYVQGVVIRVRGPVFVTSFSPLCMIITAALGSIVLAEKIHLGSVIGAVVIVSGLYTVVWGKTKDHLISSTASLTNEKTGLQELPITSVNATKINGHDEISKAPPT 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11243721 11245515 + Conep04aG0144400.1 Cone4ag1395 436373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1395 378 PANTHER WAT1-RELATED PROTEIN 21 344 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cone4ag1395 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 152 - -
Cone4ag1395 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 335 - -
Cone4ag1395 378 Pfam EamA-like transporter family 31 152 IPR000620 GO:0016020(InterPro)
Cone4ag1395 378 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0293 Cone-Chr10:1389563 Cone4ag1395 Cone-Chr4:11243721 3.13E-120 dispersed
Cone11ag1117 Cone-Chr11:8677300 Cone4ag1395 Cone-Chr4:11243721 1.18E-122 dispersed
Cone13ag1320 Cone-Chr13:9780093 Cone4ag1395 Cone-Chr4:11243721 2.09E-119 dispersed
Cone16ag0385 Cone-Chr16:6234013 Cone4ag1395 Cone-Chr4:11243721 2.44E-77 dispersed
Cone19ag1306 Cone-Chr19:8813105 Cone4ag1395 Cone-Chr4:11243721 3.36E-127 dispersed
Cone4ag1395 Cone-Chr4:11243721 Cone5ag0463 Cone-Chr5:1957745 2.44E-117 dispersed
Cone4ag1395 Cone-Chr4:11243721 Cone7ag1542 Cone-Chr7:10639328 3.10E-249 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1395 - - - 0.0