Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1417 ATGGCGGAGGAGAAGAAGGAGATGTTCGATGCGGTGGCCGCGGCGGCGATGGTGAAGGAACTAAGAGTTACCTTTGCATCTGGAAAAACTCGGAGCTATGAGTGGAGAGTATCGCAGCTGAAGAAGCTTGTGAATCTCTGCGATAATCACGAGCAGGAGATTACCGATGCTCTTGGCTCTGACCTCTCTAAGCCAGACCTTGAATCCATCGTCTTCGAGATCGCTATGTTGAAAACTTCTTGTCAGACGGCACTTAAAGAACTCAAGCGCTGGATGAAGCCGGAAAAGGTTAAAACTTCACTTACGACATTTCCTTCGTCAGCTGAAATTGTATCAGAACCATTAGGTGTCGCGTTGATCATTTCAGCATGGAATTATCCGTTCTTGTTGTCTCTTGATCCAGTTGTTGGAGCCATAGCAGGTGGTAATACCGTGGTTCTAAAGCCATCAGAAATGGCTCCCGCAGCATCCTCTTTGCTTGCGAAACTATTGGGACAATACATGGATAACTCTGCTGTTAAAGTTGTTGAGGGAGCTGTTTCCGAAACTAGTGCTTTACTCGAGCAGAAATGGGACAAAATATTTTATACGGGAAATTCAAGAGTGGGACGCATTGTGATGGCTGCTGCGGCTAGGCACCTTACACCAGTTGTTTTAGAGCTTGGTGGAAAATCTCCAGTTGTGGTTGACTCCGACATCAATTTACAAGTTGCAACCAGGCGGATAATAGCCGGTAAATGGGGTAGTAATAATGGGCAAGCATGCATTGCTTGTGACTATGTACTTACAACAAAAGAATTTGCTTCTAAGCTGGTGGAATCTTTTAAACAAGAGCTGGAAAAATTCTATGGGAAGAACCCATTGGAATCGAAAGACTTGTCCCGTGTTGTAAATTCGACCCACTTTGCTCGCCTAACAAGGCTTTTGGACGATGACAAAGTTGACGGCAAGATTGTCCATGGAGGTGGAAGGGACAAAACCAACTTGAGAATCGCTCCCACTATTTTGCTGGATGTCCCACGTGACTCTCTGGTGATGACCGAGGAGATATTTGGCCCCCTGCTTGCCATCGTCACGGTTGACAAAATAGAAGACAGCTTTGATGTGATAAACTCGGCCCCAAAGCCCTTGGCAGCCTATTTATTTACTAACAACAAGAAGCTCAAGGAGCGGTTTGTCTCCTCCGTCTCTGCAGGGGGTATAGTAATCAACGACACAGCCGTACATCTTGCGGAACACACGCTACCATTTGGAGGAGTTGGGGAAAGTGGAGTAGGAGCGTATCATGGGAAGTTTTCTTTCGATGCTTTTACCCATAAGAAGGTAGTTCTGTATCGAGGATTTGGGGGCGATGTATCGGTGAGATATCCACCATATACTAAGGGGAAGTTAAGACTCCTCAAGGCTCTCATTGATGGTAGTATATTTGGTATAATCCGAGCTATTTTCGGTAGATTTTGA 1461 45.72 MAEEKKEMFDAVAAAAMVKELRVTFASGKTRSYEWRVSQLKKLVNLCDNHEQEITDALGSDLSKPDLESIVFEIAMLKTSCQTALKELKRWMKPEKVKTSLTTFPSSAEIVSEPLGVALIISAWNYPFLLSLDPVVGAIAGGNTVVLKPSEMAPAASSLLAKLLGQYMDNSAVKVVEGAVSETSALLEQKWDKIFYTGNSRVGRIVMAAAARHLTPVVLELGGKSPVVVDSDINLQVATRRIIAGKWGSNNGQACIACDYVLTTKEFASKLVESFKQELEKFYGKNPLESKDLSRVVNSTHFARLTRLLDDDKVDGKIVHGGGRDKTNLRIAPTILLDVPRDSLVMTEEIFGPLLAIVTVDKIEDSFDVINSAPKPLAAYLFTNNKKLKERFVSSVSAGGIVINDTAVHLAEHTLPFGGVGESGVGAYHGKFSFDAFTHKKVVLYRGFGGDVSVRYPPYTKGKLRLLKALIDGSIFGIIRAIFGRF 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11327271 11330228 + Conep04aG0146900.1 Cone4ag1417 436395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1417 486 PIRSF ALDH 2 481 IPR012394 GO:0006081(InterPro)
Cone4ag1417 486 SUPERFAMILY ALDH-like 16 452 IPR016161 GO:0016491(InterPro)
Cone4ag1417 486 FunFam Aldehyde dehydrogenase 223 423 - -
Cone4ag1417 486 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 219 226 IPR029510 GO:0016491(InterPro)
Cone4ag1417 486 FunFam Aldehyde dehydrogenase 22 226 - -
Cone4ag1417 486 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 223 423 IPR016163 GO:0016620(InterPro)
Cone4ag1417 486 PANTHER ALDEHYDE DEHYDROGENASE 14 481 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(InterPro)|GO:0006081(PANTHER)
Cone4ag1417 486 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 441 IPR016162 GO:0016491(InterPro)
Cone4ag1417 486 Pfam Aldehyde dehydrogenase family 13 443 IPR015590 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1417 Cone-Chr4:11327271 Cone6ag1661 Cone-Chr6:12657126 2.30E-153 dispersed
Cone4ag1417 Cone-Chr4:11327271 Cone6ag1237 Cone-Chr6:9852226 1.05E-223 wgd
Cone4ag1417 Cone-Chr4:11327271 Cone7ag1521 Cone-Chr7:10561375 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1417 K00128 - mtr:25482459 736.873