Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cone4ag1434	ATGTTAATAAGAAAACCATGCAGCTATATCATCACCCTTACTCTTTGGATAGCCAAAAGGTATATAGAAAGAATTGCGCTTGTGTCATCAAGGGCCGATGAGATGACACCAAGTAGTAGGGAAGTAGTTGAATGGATGCACAAGATCCAAGAATGGAACCCTAAATTCTTTACACTCTCCCATATCCCGGAAAAGCACCGCCTCTTTGTCACAAAATTCATAAGAAGAGTGGTAATTGCCCGTATGGCAGAATCACCCGATCTGGCATCTGCTTACCATCAAAAGCTAAGAGAAGCATACGAGACAGAGGACAAGTTGAAAAATCCCAACTCTGCAAAGCAAAGTGAAGAGCACTTAGTCCGAATTCTTGACGAAGTTGAAGAAAAGCTGACGGAAAGTGAATTCTTGGCAGGAGATGAGTTCTCTATGGCAGATGTAATGTTCATTCCGGTTTTGGCTCGTTTAGTGCTGTTGAACTTGGAAGAAGAGTATATAGTTAGTAGGCTGAATATTGCGGAGTATTGGGTTACGGTGCAGCAGAGGCCGAGCTATAAGAAGGTGATTGGGAAACACTTCAAGGGTTGGAGAAGCCACAAGACATTAATGAAGTCTTGGTGCTTTGTTCATATCAGAAGTTTGCTGAAAAGATACTGA	654	42.2	MLIRKPCSYIITLTLWIAKRYIERIALVSSRADEMTPSSREVVEWMHKIQEWNPKFFTLSHIPEKHRLFVTKFIRRVVIARMAESPDLASAYHQKLREAYETEDKLKNPNSAKQSEEHLVRILDEVEEKLTESEFLAGDEFSMADVMFIPVLARLVLLNLEEEYIVSRLNIAEYWVTVQQRPSYKKVIGKHFKGWRSHKTLMKSWCFVHIRSLLKRY	217

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
4	11403220	11405814	-	Conep04aG0148600.1	Cone4ag1434	436412

Annotation

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Cone4ag1434	217	ProSiteProfiles	Soluble glutathione S-transferase C-terminal domain profile.	71	197	IPR010987	-
Cone4ag1434	217	Gene3D	-	69	188	-	-
Cone4ag1434	217	Pfam	Glutathione S-transferase, C-terminal domain	114	161	-	-
Cone4ag1434	217	SUPERFAMILY	GST C-terminal domain-like	101	192	IPR036282	-
Cone4ag1434	217	PANTHER	GLUTATHIONE S-TRANSFERASE TCHQD	10	217	IPR044617	GO:0004364(InterPro)

Pathway

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cone4ag1434	K22077	-	-	csv:101222476	316.235

Dupl-types

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	Cone4ag1434	Cone-Chr4:11403220	Cone7ag1501	Cone-Chr7:10488228	3.30E-19	wgd

Deco-Alignment

Select	Vvi1	Blo1	Blo2	Bda1	Bda2	Bpe1	Bpe2	Bma1	Bma2	Cmo1	Cmo2	Cma1	Cma2	Car1	Car2	Sed1	Cpe1	Cpe2	Bhi1	Tan1	Cmetu1	Lac1	Hepe1	Mch1	Lcy1	Cla1	Cam1	Cec1	Cco1	Clacu1	Cmu1	Cre1	Cone1	Cone2	Cone3	Cone4	Lsi1	Csa1	Chy1	Cme1	Blo3	Blo4	Bda3	Bda4	Bpe3	Bpe4	Bma3	Bma4	Sed2	Cmo3	Cmo4	Cma3	Cma4	Car3	Car4	Cpe3	Cpe4	Bhi2	Tan2	Cmetu2	Lac2	Hepe2	Mch2	Lcy2	Cla2	Cam2	Cec2	Cco2	Clacu2	Cmu2	Cre2	Lsi2	Csa2	Chy2	Cme2
	Vvi18g210	Blo01g01309	.	Bda01g00677	.	Bpe02g00628	.	.	Bma01g02091	.	.	Cma01g01364	Cma09g00767	.	.	.	Cpe06g00604	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Cone4ag1434	Cone7ag1501	.	.	.	Csa04g01774	.	.	.	.	.	.	.	.	.	.	.	Cmo01g01417	Cmo09g00759	.	.	.	Car09g00677	.	Cpe02g00572	Bhi09g02716	.	.	.	.	.	.	Cla11g01560	Cam11g1625	Cec11g1651	.	Clacu11g1781	Cmu11g1597	.	.	.	Chy07g00602	Cme07g00806

Syn-Families

Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
Cone17ag0504	.	1	209	Glutathione S-transferase Gene Family	AT4G02520	59.4	5.0e-65	245.0
Cone17ag0506	.	1	209	Glutathione S-transferase Gene Family	AT4G02520	59.0	1.5e-64	243.4
Cone20ag0934	.	1	209	Glutathione S-transferase Gene Family	AT4G02520	59.0	5.5e-64	241.5
Cone20ag0932	.	1	205	Glutathione S-transferase Gene Family	AT4G02520	56.3	4.4e-61	231.9
Cone20ag0933	.	1	205	Glutathione S-transferase Gene Family	AT4G02520	56.7	2.2e-60	229.6
Cone17ag0505	.	1	205	Glutathione S-transferase Gene Family	AT4G02520	54.8	1.2e-58	223.8
Cone17ag0504	.	1	210	Glutathione S-transferase Gene Family	AT2G02930	59.6	3.1e-67	252.3
Cone17ag0506	.	1	210	Glutathione S-transferase Gene Family	AT2G02930	59.2	2.7e-66	249.2
Cone20ag0934	.	1	210	Glutathione S-transferase Gene Family	AT2G02930	59.2	1.0e-65	247.3
Cone20ag0933	.	1	208	Glutathione S-transferase Gene Family	AT2G02930	58.5	1.4e-62	236.9
Cone20ag0932	.	1	208	Glutathione S-transferase Gene Family	AT2G02930	56.4	1.8e-62	236.5
Cone17ag0505	.	1	208	Glutathione S-transferase Gene Family	AT2G02930	56.6	7.5e-61	231.1
Cone17ag0506	.	5	203	Glutathione S-transferase Gene Family	AT1G02950	57.5	1.3e-62	237.3
Cone20ag0932	.	5	206	Glutathione S-transferase Gene Family	AT1G02950	55.7	6.2e-62	235.0
Cone20ag0933	.	5	211	Glutathione S-transferase Gene Family	AT1G02950	53.8	8.2e-62	234.6
Cone17ag0504	.	5	205	Glutathione S-transferase Gene Family	AT1G02950	55.9	1.8e-61	233.4
Cone17ag0505	.	5	206	Glutathione S-transferase Gene Family	AT1G02950	53.7	1.2e-60	230.7
Cone20ag0934	.	5	205	Glutathione S-transferase Gene Family	AT1G02950	55.0	7.6e-60	228.0
Cone20ag0933	.	1	205	Glutathione S-transferase Gene Family	AT1G02930	59.0	2.4e-64	242.7
Cone17ag0506	.	1	210	Glutathione S-transferase Gene Family	AT1G02930	56.2	1.2e-63	240.4
Cone17ag0504	.	1	210	Glutathione S-transferase Gene Family	AT1G02930	56.2	1.6e-63	240.0
Cone20ag0932	.	1	205	Glutathione S-transferase Gene Family	AT1G02930	57.1	1.6e-63	240.0
Cone17ag0505	.	1	205	Glutathione S-transferase Gene Family	AT1G02930	57.6	6.0e-63	238.0
Cone20ag0934	.	1	210	Glutathione S-transferase Gene Family	AT1G02930	55.2	2.3e-62	236.1
Cone20ag0933	.	1	205	Glutathione S-transferase Gene Family	AT1G02920	59.5	1.1e-64	243.8
Cone17ag0506	.	1	210	Glutathione S-transferase Gene Family	AT1G02920	56.2	9.3e-64	240.7
Cone17ag0504	.	1	210	Glutathione S-transferase Gene Family	AT1G02920	56.2	1.2e-63	240.4
Cone20ag0932	.	1	205	Glutathione S-transferase Gene Family	AT1G02920	57.1	1.2e-63	240.4
Cone17ag0505	.	1	205	Glutathione S-transferase Gene Family	AT1G02920	58.0	2.7e-63	239.2
Cone20ag0934	.	1	210	Glutathione S-transferase Gene Family	AT1G02920	55.7	1.0e-62	237.3
Cone17ag0504	.	1	213	Glutathione S-transferase Gene Family	AT2G47730	55.1	2.2e-62	236.5
Cone17ag0506	.	1	213	Glutathione S-transferase Gene Family	AT2G47730	55.1	2.2e-62	236.5
Cone20ag0933	.	1	213	Glutathione S-transferase Gene Family	AT2G47730	55.6	1.4e-61	233.8
Cone20ag0934	.	1	213	Glutathione S-transferase Gene Family	AT2G47730	53.7	3.2e-61	232.6
Cone20ag0932	.	1	213	Glutathione S-transferase Gene Family	AT2G47730	54.2	7.1e-61	231.5
Cone17ag0505	.	1	213	Glutathione S-transferase Gene Family	AT2G47730	54.2	3.5e-60	229.2
Cone4ag0862	.	12	208	Glutathione S-transferase Gene Family	AT2G30870	51.8	1.3e-55	213.8
Cone4ag0862	.	1	213	Glutathione S-transferase Gene Family	AT3G03190	56.3	5.4e-67	251.5
Cone4ag0862	.	1	213	Glutathione S-transferase Gene Family	AT5G17220	54.9	2.2e-68	256.1
Cone7ag0797	.	1	140	Glutathione S-transferase Gene Family	AT5G17220	55.0	4.8e-39	158.7
Cone20ag0931	.	5	226	Glutathione S-transferase Gene Family	AT3G62760	59.5	1.0e-73	273.9
Cone20ag0933	.	5	210	Glutathione S-transferase Gene Family	AT3G62760	51.7	1.2e-53	207.2
Cone17ag0505	.	5	210	Glutathione S-transferase Gene Family	AT3G62760	51.2	1.0e-52	204.1
Cone20ag0934	.	5	209	Glutathione S-transferase Gene Family	AT3G62760	51.0	9.5e-51	197.6
Cone17ag0505	.	4	213	Glutathione S-transferase Gene Family	AT1G49860	50.5	4.2e-50	195.7
Cone19ag1361	.	3	218	Glutathione S-transferase Gene Family	AT3G09270	58.3	4.6e-69	258.5
Cone13ag0990	.	6	219	Glutathione S-transferase Gene Family	AT1G69930	54.7	5.0e-66	248.4
Cone19ag0984	.	6	219	Glutathione S-transferase Gene Family	AT1G69930	54.2	1.6e-64	243.4
Cone19ag0984	.	2	218	Glutathione S-transferase Gene Family	AT1G69920	50.7	6.0e-57	218.4
Cone13ag0990	.	3	218	Glutathione S-transferase Gene Family	AT1G27130	51.4	9.5e-62	234.2
Cone19ag0984	.	1	218	Glutathione S-transferase Gene Family	AT1G27130	50.7	4.0e-60	228.8
Cone13ag0990	.	6	218	Glutathione S-transferase Gene Family	AT1G27140	50.9	3.6e-59	225.7
Cone13ag0990	.	5	225	Glutathione S-transferase Gene Family	AT1G59670	55.2	8.2e-69	257.7
Cone19ag0984	.	5	225	Glutathione S-transferase Gene Family	AT1G59670	54.7	2.4e-68	256.1
Cone13ag0990	.	5	226	Glutathione S-transferase Gene Family	AT1G59700	57.6	5.5e-73	271.6
Cone19ag0984	.	5	226	Glutathione S-transferase Gene Family	AT1G59700	57.1	3.6e-72	268.9
Cone13ag0990	.	1	218	Glutathione S-transferase Gene Family	AT1G10370	70.8	7.7e-88	320.9
Cone19ag0984	.	1	226	Glutathione S-transferase Gene Family	AT1G10370	69.6	2.9e-87	318.9
Cone13ag0990	.	1	226	Glutathione S-transferase Gene Family	AT1G10360	65.6	6.7e-84	307.8
Cone19ag0984	.	1	226	Glutathione S-transferase Gene Family	AT1G10360	65.6	2.2e-82	302.8
Cone15ag0988	.	1	215	Glutathione S-transferase Gene Family	AT1G78380	73.0	5.3e-94	341.3
Cone14ag0993	.	1	216	Glutathione S-transferase Gene Family	AT1G78380	74.1	2.0e-93	339.3
Cone15ag0990	.	1	216	Glutathione S-transferase Gene Family	AT1G78380	66.2	1.7e-84	309.7
Cone5ag0275	.	1	219	Glutathione S-transferase Gene Family	AT1G78380	58.0	1.1e-75	280.4
Cone11ag0233	.	5	218	Glutathione S-transferase Gene Family	AT1G78380	57.9	5.0e-68	255.0
Cone15ag0988	.	1	216	Glutathione S-transferase Gene Family	AT1G78370	68.5	9.0e-86	313.9
Cone14ag0993	.	1	214	Glutathione S-transferase Gene Family	AT1G78370	68.7	5.8e-85	311.2
Cone15ag0990	.	1	214	Glutathione S-transferase Gene Family	AT1G78370	63.1	6.9e-78	287.7
Cone5ag0275	.	6	205	Glutathione S-transferase Gene Family	AT1G78370	58.0	1.4e-67	253.4
Cone11ag0233	.	8	218	Glutathione S-transferase Gene Family	AT1G78370	55.0	1.1e-62	237.3
Cone14ag0993	.	1	214	Glutathione S-transferase Gene Family	AT1G78340	65.9	2.1e-82	302.8
Cone15ag0988	.	1	214	Glutathione S-transferase Gene Family	AT1G78340	64.5	4.6e-82	301.6
Cone15ag0990	.	1	214	Glutathione S-transferase Gene Family	AT1G78340	60.7	7.9e-74	274.2
Cone5ag0275	.	1	205	Glutathione S-transferase Gene Family	AT1G78340	56.6	2.9e-68	255.8
Cone11ag0233	.	5	219	Glutathione S-transferase Gene Family	AT1G78340	55.3	1.7e-63	240.0
Cone14ag0993	.	1	214	Glutathione S-transferase Gene Family	AT1G78320	57.9	4.6e-65	245.0
Cone15ag0988	.	1	214	Glutathione S-transferase Gene Family	AT1G78320	56.1	5.1e-64	241.5
Cone15ag0990	.	1	214	Glutathione S-transferase Gene Family	AT1G78320	50.9	3.9e-56	215.3
Cone14ag0993	.	1	219	Glutathione S-transferase Gene Family	AT1G17180	70.3	1.5e-91	333.2
Cone15ag0988	.	1	218	Glutathione S-transferase Gene Family	AT1G17180	68.3	7.2e-91	330.9
Cone15ag0990	.	1	219	Glutathione S-transferase Gene Family	AT1G17180	62.1	5.2e-81	298.1
Cone5ag0275	.	1	219	Glutathione S-transferase Gene Family	AT1G17180	56.2	2.0e-72	269.6
Cone11ag0233	.	5	223	Glutathione S-transferase Gene Family	AT1G17180	56.6	3.9e-68	255.4
Cone14ag0993	.	3	217	Glutathione S-transferase Gene Family	AT1G17190	61.9	2.8e-79	292.4
Cone15ag0988	.	3	217	Glutathione S-transferase Gene Family	AT1G17190	60.5	2.4e-78	289.3
Cone15ag0990	.	4	217	Glutathione S-transferase Gene Family	AT1G17190	58.9	6.1e-74	274.6
Cone5ag0275	.	1	218	Glutathione S-transferase Gene Family	AT1G17190	53.4	6.8e-65	244.6
Cone14ag0993	.	3	214	Glutathione S-transferase Gene Family	AT3G43800	59.7	4.5e-72	268.5
Cone15ag0988	.	3	214	Glutathione S-transferase Gene Family	AT3G43800	56.9	1.0e-68	257.3
Cone15ag0990	.	3	214	Glutathione S-transferase Gene Family	AT3G43800	52.3	7.8e-64	241.1
Cone11ag0233	.	5	219	Glutathione S-transferase Gene Family	AT3G43800	50.2	3.8e-63	238.8
Cone15ag0988	.	4	218	Glutathione S-transferase Gene Family	AT1G53680	58.5	4.9e-71	265.0
Cone14ag0993	.	4	219	Glutathione S-transferase Gene Family	AT1G53680	57.3	6.1e-69	258.1
Cone5ag0275	.	1	219	Glutathione S-transferase Gene Family	AT1G53680	55.4	8.2e-66	247.7
Cone15ag0990	.	4	219	Glutathione S-transferase Gene Family	AT1G53680	55.0	8.2e-66	247.7
Cone11ag0233	.	3	223	Glutathione S-transferase Gene Family	AT1G53680	58.3	1.1e-65	247.3
Cone19ag0698	.	50	217	Glutathione S-transferase Gene Family	AT2G02390	63.7	2.2e-59	226.1
Cone13ag0703	.	50	216	Glutathione S-transferase Gene Family	AT2G02390	58.9	3.9e-56	215.3
Cone15ag0330	.	59	195	Glutathione S-transferase Gene Family	AT2G02390	54.0	2.4e-37	152.9
Cone19ag0698	.	7	217	Glutathione S-transferase Gene Family	AT2G02380	63.5	8.1e-74	274.2
Cone13ag0703	.	1	216	Glutathione S-transferase Gene Family	AT2G02380	59.5	2.2e-71	266.2
Cone15ag0330	.	17	195	Glutathione S-transferase Gene Family	AT2G02380	55.3	1.9e-51	199.9
Cone9ag0776	.	1	244	Glutathione S-transferase Gene Family	AT5G41210	65.6	3.3e-92	335.5
Cone9ag0776	.	1	250	Glutathione S-transferase Gene Family	AT5G41240	62.4	7.3e-90	328.9
Cone10ag0272	.	15	233	Glutathione S-transferase Gene Family	AT5G02780	70.9	7.3e-89	324.3
Cone3ag0299	.	304	530	Glutathione S-transferase Gene Family	AT5G02780	64.9	1.7e-85	313.2
Cone13ag1302	.	14	232	Glutathione S-transferase Gene Family	AT5G02780	65.0	2.5e-81	299.3
Cone1ag1330	.	80	297	Glutathione S-transferase Gene Family	AT5G02780	63.2	1.9e-76	283.1
Cone3ag0300	.	473	658	Glutathione S-transferase Gene Family	AT5G02780	57.3	8.6e-66	247.7
Cone1ag1330	.	78	298	Glutathione S-transferase Gene Family	AT3G55040	66.7	2.6e-80	296.2
Cone3ag0299	.	292	531	Glutathione S-transferase Gene Family	AT3G55040	59.2	9.9e-80	294.3
Cone10ag0272	.	12	236	Glutathione S-transferase Gene Family	AT3G55040	60.4	9.9e-80	294.3
Cone13ag1302	.	12	232	Glutathione S-transferase Gene Family	AT3G55040	58.4	2.5e-75	279.6
Cone3ag0300	.	471	662	Glutathione S-transferase Gene Family	AT3G55040	50.7	5.1e-60	228.8
Cone10ag0272	.	8	233	Glutathione S-transferase Gene Family	AT5G02790	71.2	1.4e-95	346.7
Cone3ag0299	.	304	532	Glutathione S-transferase Gene Family	AT5G02790	69.9	4.8e-93	338.2
Cone13ag1302	.	6	232	Glutathione S-transferase Gene Family	AT5G02790	67.0	3.6e-88	322.0
Cone1ag1330	.	74	299	Glutathione S-transferase Gene Family	AT5G02790	63.9	4.2e-81	298.5
Cone3ag0300	.	467	661	Glutathione S-transferase Gene Family	AT5G02790	59.2	6.1e-72	268.1
Cone1ag1319	.	1	213	Glutathione S-transferase Gene Family	AT1G19570	70.6	1.5e-85	313.2
Cone5ag0301	.	1	205	Glutathione S-transferase Gene Family	AT1G19570	66.8	1.4e-78	290.0
Cone16ag0611	.	104	311	Glutathione S-transferase Gene Family	AT1G19570	59.8	5.2e-70	261.5
Cone1ag1319	.	1	212	Glutathione S-transferase Gene Family	AT1G75270	74.2	2.0e-90	329.3
Cone5ag0301	.	1	204	Glutathione S-transferase Gene Family	AT1G75270	70.0	6.6e-81	297.7
Cone16ag0611	.	104	311	Glutathione S-transferase Gene Family	AT1G75270	63.2	2.0e-74	276.2
Cone16ag0611	.	95	311	Glutathione S-transferase Gene Family	AT5G16710	76.0	6.0e-97	351.3
Cone1ag1319	.	3	211	Glutathione S-transferase Gene Family	AT5G16710	62.2	3.2e-74	275.8
Cone5ag0301	.	3	203	Glutathione S-transferase Gene Family	AT5G16710	59.3	1.1e-66	250.8
Cone2ag0396	.	12	242	Glutathione S-transferase Gene Family	AT5G16710	50.6	7.5e-63	238.0
Cone4ag1434	.	8	217	Glutathione S-transferase Gene Family	AT1G77290	65.2	1.7e-73	273.5
Cone7ag1501	.	1	114	Glutathione S-transferase Gene Family	AT1G77290	66.7	1.9e-37	153.7

Syn-Orthogroups

Select	Orthogroup	Bda	Bhi	Blo	Bma	Bpe	Cam	Car	Cco	Cec	Chy	Cla	Clacu	Cma	Cme	Cmetu	Cmo	Cmu	Cone	Cpe	Cre	Csa	HCH	Hepe	Lac	Lcy	Lsi	Mch	Sed	Tan	Vvi	Total
	OG0005962	2	5	1	1	1	0	2	0	0	1	1	1	2	1	1	2	0	1	2	0	1	1	1	1	1	1	1	1	2	1	35