Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1443 ATGTTCCATTTTCCAAGAAAATTAAAAAACCCAGGAAAAAAAAAACAAAACAGAACTATGTTTGAATTTGATCCTGTTACAAAACCATCACAAAAACCAGATGATAGTAAGCTCAAAAACTCCGCTTCAGATGCTAAAAAACCGTCATCTCTCAAATTGAGCAATAACAGAAGTTGGGATGATGGCAGAACGAAGGTCGATGATGATAACGGCATGTCGGAATCAGGGGTTTGCTCTCCACCTTTATGGAAAACGACAAGTAGTACGACGACTACTAGTCCACCAAGAAGCCCCCCACAGTATTACCGAACAAATTACCGCGCCTTATCACCCACTTCAAGAGCTCAGGCAATCGCCAGAGGACAGAGAGAGCTAATGGAAATGGTCCGAAACTTACCTGAGTCATGTTACGAGCTGTCGTTAAAAGATCTCGTGGAGCACCCATTGGTTCTAGCACGACATGTCGTCGAGCCGACTACTGCCCCTTCTCCCCCTCCTGAAGCGGAAGAGGAAGAGAAAAAGATCGTATACAGAAGAGATCGTAGCGGTAAGGTCAAGAAGACAGCTCAAGGTAGGATTAATGGAGAGATGGGTAATGGTGGGTATTATCTGAAAATGGGATTTCCGATATTTTTGGGGTCAATCAAGAATAAAAATAAAAATAAAAATAAGAAGAAGAAGAAGAAGGTGAAGAATAGCAGTGAATCTGATGCTAGTGGGAAAGGTAGTGAAAAGGAGTGGTGGAAGAAGAGGGGTTCTAGTGCGAGTGATCGGAGCGAGAGCTGTGGATCGAGCGTTAATGGCGGAAGTTTAAAGAGTAGTAGCAGCAGAAGCAGTAGCACAACTAGCAGGCGCAGCAGTGCAAGCAGGGGATGCTGGACCTGTATTTCCAGAAAAGTTGAAAATCCCTAA 912 43.86 MFHFPRKLKNPGKKKQNRTMFEFDPVTKPSQKPDDSKLKNSASDAKKPSSLKLSNNRSWDDGRTKVDDDNGMSESGVCSPPLWKTTSSTTTTSPPRSPPQYYRTNYRALSPTSRAQAIARGQRELMEMVRNLPESCYELSLKDLVEHPLVLARHVVEPTTAPSPPPEAEEEEKKIVYRRDRSGKVKKTAQGRINGEMGNGGYYLKMGFPIFLGSIKNKNKNKNKKKKKKVKNSSESDASGKGSEKEWWKKRGSSASDRSESCGSSVNGGSLKSSSSRSSSTTSRRSSASRGCWTCISRKVENP 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11463939 11465326 - Conep04aG0149500.1 Cone4ag1443 436421

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1443 303 MobiDBLite consensus disorder prediction 230 256 - -
Cone4ag1443 303 MobiDBLite consensus disorder prediction 79 105 - -
Cone4ag1443 303 MobiDBLite consensus disorder prediction 257 291 - -
Cone4ag1443 303 MobiDBLite consensus disorder prediction 166 187 - -
Cone4ag1443 303 MobiDBLite consensus disorder prediction 43 57 - -
Cone4ag1443 303 MobiDBLite consensus disorder prediction 215 291 - -
Cone4ag1443 303 MobiDBLite consensus disorder prediction 1 105 - -
Cone4ag1443 303 MobiDBLite consensus disorder prediction 157 194 - -
Cone4ag1443 303 PANTHER OS11G0199801 PROTEIN 46 299 - -
Cone4ag1443 303 MobiDBLite consensus disorder prediction 28 42 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1443 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1443 Cone-Chr4:11463939 Cone7ag1493 Cone-Chr7:10448670 1.84E-93 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi7g1251 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone4ag1443 Cone7ag1493 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Vvi18g142 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone4ag1443 . Cone17ag1434 Cone20ag0049 . Csa04g02677 . . Blo17g00725 Blo18g00760 Bda08g01185 Bda01g01548 Bpe02g01744 . Bma01g00714 . . . . . . . . . . Bhi09g02938 Tan01g5067 Cmetu07g1022 . Hepe01g2315 Mch11g0078 . . . . . . . . . . Chy07g00368 Cme07g00080
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003520 0 2 1 0 0 1 1 1 1 1 1 1 3 2 2 2 1 2 3 1 2 2 2 2 2 2 2 4 2 0 46