Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag1446 | ATGTCGTCTAGGGATCCAGATTCCCTCTTCAGTGGTGGCGGTATCAGCTTTCTGACTGGGAGCCGGAATGGAAGGTTCAGCTATGGCTATTCCAGTTTCAAAGGCAAAAGATCTTCAATGGAGGATTACTTTGAGACAAAAGTTTCAGAGGTTGATGGTCAGATGGTCGCCTTTTTTGGAGTTTTTGATGGTCATGGAGGCTCCAGAACAGCAGAATACCTCAAAAACAACCTTTTCAAGAATTTAAGTAGCCATCCAGAGTTCATCACCGATACAAAGACTGCTATTGTGGAGGTGTTTAGAAAGACAGATGCTGATTATCTCAATGAAGAAAAAGGACAGCAAAAAGATGCTGGGTCAACTGCGACCACTGCTCTCTTAGTTGGGGACCGCCTCCTCATCGCTAATGTTGGTGATTCCAGAGTCGTTGCCTCTAGAGGTGGTTCAGCTATTCCGCTATCAATTGATCATAAACCTGATAGGTCTGATGAACGGAAAAGGATTGAACAGGCTGGAGGTTTTATTATTTGGGCAGGAACCTGGCGTGTGGGTGGGATTCTTGCTGTTTCTCGGGCCTTTGGAGACAAGTTATTGAAGCCGTATGTGGTTGCAGAACCAGAGATTCAGGAGGAAGAAATTCATGGGGTAGATTTTATAATTATTGCTAGTGATGGGCTTTGGAATGTGATATCGAATAGGGATGCCGTAGGTTTAGTGCAAGATATACAAGACGCGGAAGTGGCATCAAGGAAGCTAATAGAAGCAGCTTATTCCCGAGGGAGTTCGGACAACATTACATGTGTTGTTGTCCGATTCGATTTAGCCTGA | 828 | 44.69 | MSSRDPDSLFSGGGISFLTGSRNGRFSYGYSSFKGKRSSMEDYFETKVSEVDGQMVAFFGVFDGHGGSRTAEYLKNNLFKNLSSHPEFITDTKTAIVEVFRKTDADYLNEEKGQQKDAGSTATTALLVGDRLLIANVGDSRVVASRGGSAIPLSIDHKPDRSDERKRIEQAGGFIIWAGTWRVGGILAVSRAFGDKLLKPYVVAEPEIQEEEIHGVDFIIIASDGLWNVISNRDAVGLVQDIQDAEVASRKLIEAAYSRGSSDNITCVVVRFDLA | 275 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 11479275 | 11481846 | - | Conep04aG0149800.1 | Cone4ag1446 | 436424 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag1446 | 275 | Pfam | Protein phosphatase 2C | 28 | 265 | IPR001932 | - | |
Cone4ag1446 | 275 | PANTHER | PROTEIN PHOSPHATASE | 27 | 270 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cone4ag1446 | 275 | SUPERFAMILY | PP2C-like | 19 | 273 | IPR036457 | - | |
Cone4ag1446 | 275 | SMART | PP2C_4 | 16 | 270 | IPR001932 | - | |
Cone4ag1446 | 275 | ProSitePatterns | PPM-type phosphatase domain signature. | 58 | 66 | IPR000222 | GO:0043169(InterPro) | |
Cone4ag1446 | 275 | FunFam | probable protein phosphatase 2C 59 | 19 | 274 | - | - | |
Cone4ag1446 | 275 | ProSiteProfiles | PPM-type phosphatase domain profile. | 27 | 272 | IPR001932 | - | |
Cone4ag1446 | 275 | CDD | PP2Cc | 26 | 272 | IPR001932 | - | |
Cone4ag1446 | 275 | Gene3D | - | 19 | 274 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag1446 | Cone-Chr4:11479275 | Cone4ag1725 | Cone-Chr4:12767565 | 1.12E-125 | dispersed | |
Cone14ag0002 | Cone-Chr14:28189 | Cone4ag1446 | Cone-Chr4:11479275 | 2.39E-32 | transposed | |
Cone4ag1446 | Cone-Chr4:11479275 | Cone5ag0192 | Cone-Chr5:795244 | 8.89E-47 | wgd | |
Cone4ag1446 | Cone-Chr4:11479275 | Cone7ag1486 | Cone-Chr7:10425499 | 4.67E-190 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag1446 | K17506 | - | rcu:8270424 | 487.263 |