Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1452 ATGGTTCTTTCGGGTCCATCCACTCCAATCAGTGGGACCCAGTCTGTTTCGCCATCACTTTTACAGTCAAATTCTGGAATATTGGGAGTACAAGGAGGTCTACTGCCTTCCCAGACAGGGTTTTCTCCACTTTTATCATCTCGTACTCAGTTTACTAATATGAACATGCTTGGTAATGTTCCAAACATGTCTTCTCTTCTAAATCAGTCGTTTGGAAATGGGGGTCCAAATTCTGGGTTTTCAGGTTCAGGAAATGGCCAGAGAGGAAGCATTGATATCAGTGCTGAGGTGGATCCACTTTCTAGATTGAGTTTCAACAATGCTTCACCATCATTTGTAACATCAAATATGGCAAATCCTGTTTCATCAGGTCAAGGTCAAATTCCACAAGTTTCAAGCCTTTCTAGTAGCCAAATATTAACAGATCAACAACACTCCCAACAACTTGACTCTCAAGCTTTCCAACTTGGTCAACACTCGAGTCAACCGTTTGCTTCCCCTATCATCATTCAGCAGCAACAACAACTTCAACAAAATCGAGGGAACCTAGGTGGGTTTGGACCTGTAAACATAGAACCCCAAATGAGTAATCTCAGTGCAGTGAAATTGGAACCCCAACAACTTCCCCCAGCTAGAAGTCTTGTTTCAGTCAAAATGGAACCCCAATATTCTGACCCATCATTGTTCTTGTATCAACAAAAGCAGCAGCTACAACAGCAGCAGCAGCAGCAGCAATTCATCCTGTCTAGGCAGTCACCTCAGCTTAATCTCTCACATCATCAGAGACTTGTGCAACAGCAGCAGCAGCAGCAGCAGCAACCCATGAAAGTCAGGCCACAAGTATCACAACAGTTTCAACAGCAGAATCTTCCATCGAGATCTAATGTAAAAGCTGGTTATGAACCTGGGATGTGTGCTAAGCGTCTTACTCATTATATGTATCATCAACAACACAGACCAGAAGACAATAACATTGAATTTTGGAGGGCATTTGTGGCCGAGTATTTTGCTCCTCAAGCCAAAAAGAAATGGTGTGTTTCCACATATGGAAGTGGCCGTCAAGCATGTGGTCGACCAACCGCTGGAGTTCACCCTCAGGATGCATGGCACTGTGAAATATGCAACCGCAAGCCTGGCCGTGGTTTTGAAGCAACAGTGGAGGTTCTTCCCAGGCTTTTCAAAATCAAATATGAAAGTGGTACTCTAGAAGAACTTCTGTATGTTGATTTTCCTCATGAGTATCATAATTCATCCGGACAGATTGTTCTGGACTATGCAAAAGCAATTCAAAAAAGTGTTTTTGAGCAACTCCGTGTTGTTCGTGATGGTCAACTTCGCATTGTTTTTTCTCCAGAACTTAAGATATGCTCTTGGGAATTTTGTGCTCGGCGTCATGAAGAGCTTCTTCCAAGAAGACTGCTAATACCTCAGGTTAGTCAGGTAGGGGGAGCTGCTCAAAAGTACCAGACTGCAGTTCAAAATGCATCATCCAATTTATCTTCTCCAGAGTTGCAAAACAGTTGTAACATGTTTGCGTCATCAGCCCGTCAATTAGCAAAGGCCGTAGAAGCCTCATTGGTAAACGATTTGGGATATACAAAGAGATTTGTGCGATGCCTTCAAATTTCAGAAGTTGTCAATAGCATGAAAGACTTGATTGATTACAGCCGAGAAACTGGGACCGGACCGATGGAGAGCTTAGCCAAATTTCCTCGAAGAACCAACGCCGCATTTGGAATCCAAAAGCAGGCTGAGGAACAACCACCTCAACAGCAGACAATGGCTCAAAACCGAAACAACAACCAAACAAGCCCTGTCCAGGATTCTTCTATGCAAATCACTACTACCAATGGTGTCACAACTGTAAATAACCCCATAAATCCAGTACCCACATCAACTGCCAGCACCATTGCCGGATTACTTCAGAATTCTATAAACTCCAGACAACACAATTCCTCTATTCATAATGCAAATCCAGTTCAGAATTCACCCCACAATTCTTCCAGTACCATTCCTCAACAAGCTCAACAAACCCCTTCTGCCTCACCCAACAATCCTCCACAGCCACCACATACTGCTGCAAATTCTCCGGCAACTATTTCCCCTCAACAGCCGGCTCTTTCCACGGAGGCCGACCCGATTGGTGGAGGAGAATCCCAAAGCTCTGTCCAGAGAATCTTACAGGAGATGATGATGTCTGGCCCACTTAATGGGACAAGTACTGTGGTTGGCGTTGGTAAAAACATGAATGGTGTTTTGTCTTCTAGCAACATGACAGGTCTCAACGGAGGGAACGGTCTGGTTGGGAACGAGTATCAAGCTATGGGTGGGGGACTTGGTCAGACCAGTATGGGTAATGGACTGAGGTCTGTGATGGGAAATAACAACACTATTATGAATGGAAGGATGGGAATGGCATCCTTGGCGCGTGACCAGAGCATGAGTAATCATCATCATCATCATCAAGAGGATTTGGAGAATAATCAAATTCTTAACGTGAGAGGAGTGGTTAATGGGTTCAATAACAATCTTCAGTTTGATTGGAAGCCATCGCCGTGA 2559 44.2 MVLSGPSTPISGTQSVSPSLLQSNSGILGVQGGLLPSQTGFSPLLSSRTQFTNMNMLGNVPNMSSLLNQSFGNGGPNSGFSGSGNGQRGSIDISAEVDPLSRLSFNNASPSFVTSNMANPVSSGQGQIPQVSSLSSSQILTDQQHSQQLDSQAFQLGQHSSQPFASPIIIQQQQQLQQNRGNLGGFGPVNIEPQMSNLSAVKLEPQQLPPARSLVSVKMEPQYSDPSLFLYQQKQQLQQQQQQQQFILSRQSPQLNLSHHQRLVQQQQQQQQQPMKVRPQVSQQFQQQNLPSRSNVKAGYEPGMCAKRLTHYMYHQQHRPEDNNIEFWRAFVAEYFAPQAKKKWCVSTYGSGRQACGRPTAGVHPQDAWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDFPHEYHNSSGQIVLDYAKAIQKSVFEQLRVVRDGQLRIVFSPELKICSWEFCARRHEELLPRRLLIPQVSQVGGAAQKYQTAVQNASSNLSSPELQNSCNMFASSARQLAKAVEASLVNDLGYTKRFVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKFPRRTNAAFGIQKQAEEQPPQQQTMAQNRNNNQTSPVQDSSMQITTTNGVTTVNNPINPVPTSTASTIAGLLQNSINSRQHNSSIHNANPVQNSPHNSSSTIPQQAQQTPSASPNNPPQPPHTAANSPATISPQQPALSTEADPIGGGESQSSVQRILQEMMMSGPLNGTSTVVGVGKNMNGVLSSSNMTGLNGGNGLVGNEYQAMGGGLGQTSMGNGLRSVMGNNNTIMNGRMGMASLARDQSMSNHHHHHQEDLENNQILNVRGVVNGFNNNLQFDWKPSP 852
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11511786 11516733 - Conep04aG0150400.1 Cone4ag1452 436430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1452 852 MobiDBLite consensus disorder prediction 258 295 - -
Cone4ag1452 852 MobiDBLite consensus disorder prediction 694 721 - -
Cone4ag1452 852 MobiDBLite consensus disorder prediction 68 91 - -
Cone4ag1452 852 MobiDBLite consensus disorder prediction 650 681 - -
Cone4ag1452 852 MobiDBLite consensus disorder prediction 583 610 - -
Cone4ag1452 852 MobiDBLite consensus disorder prediction 68 90 - -
Cone4ag1452 852 Pfam LIM-domain binding protein 308 567 IPR029005 -
Cone4ag1452 852 MobiDBLite consensus disorder prediction 258 297 - -
Cone4ag1452 852 MobiDBLite consensus disorder prediction 650 721 - -
Cone4ag1452 852 PANTHER LIM DOMAIN-BINDING PROTEIN 4 844 IPR029005 GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER)
Cone4ag1452 852 MobiDBLite consensus disorder prediction 116 150 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1452 Cone-Chr4:11511786 Cone5ag0840 Cone-Chr5:3596482 3.14E-100 dispersed
Cone17ag0802 Cone-Chr17:6346743 Cone4ag1452 Cone-Chr4:11511786 9.46E-270 wgd
Cone20ag0406 Cone-Chr20:1971557 Cone4ag1452 Cone-Chr4:11511786 9.00E-256 wgd
Cone4ag1452 Cone-Chr4:11511786 Cone7ag1480 Cone-Chr7:10392817 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1452 - - - 0.0