Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1489 ATGGCCGAAGAGAAGCACCACCACCACGGCCTCTTCCACCACCACAAGGACGAGGACAAGCCTGTTGAGACCTCTTACTCCGAGACCGCCGAGGACTTCTCCAAGCCCTCCGGATATGGTGCTGGCGGGGGCTACGGTGACTCCACCGGAGACTATTCCACTGAGCGCCCTTCTGGCCGCTACAGTGATGTTGACCGCCCTTCCGGCGGCTACGGTAACGTCGACCGCCCTTCCGGCGGATACGGCGATGTCGACCGCCCTTCCGGCGGATACGGCGATGTCGACCGCCCTTCCGGCGGCTACGGCGATGTCGACCGCCCTTCCGGTGGCTACGGTGATGTTGACCGTCCATCCGGTGGCTACGGTGATGTTGACCGCCCATCTGGCGGCTATGGTGGTGGCTACAATGAGACCACTGACCGCCCTTCCGGCGGTGGTGGTTTCAGTGAGACCACTGTGGTTGAAACCATTGAGAAGCCTGAAGTTGATTACGAGAAGGAGGAGAAGCACCACAAGCATCTCGAGCACTTAGGTGAACTTGGTGTTGCTGCAGCTGGGGCATATGCTCTGCACGAGAAGCATAAGGAAAAGAAGGACCCGGAGCATTCTCACAGGCACAAGATTGAGGAGGAGATAGCGGCGGCGGCCGCAGTGGGAGCTGGAGGGTTTGCATTCCATGAGCACCATGAGAAGAAGGAGACTAAGGAGGAGGAGGAAGAGGCTCATGGAAAGAAGCACCACCATCTCTTCTAA 753 59.1 MAEEKHHHHGLFHHHKDEDKPVETSYSETAEDFSKPSGYGAGGGYGDSTGDYSTERPSGRYSDVDRPSGGYGNVDRPSGGYGDVDRPSGGYGDVDRPSGGYGDVDRPSGGYGDVDRPSGGYGDVDRPSGGYGGGYNETTDRPSGGGGFSETTVVETIEKPEVDYEKEEKHHKHLEHLGELGVAAAGAYALHEKHKEKKDPEHSHRHKIEEEIAAAAAVGAGGFAFHEHHEKKETKEEEEEAHGKKHHHLF 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11648828 11650176 - Conep04aG0154100.1 Cone4ag1489 436467

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1489 250 PANTHER ABSCISIC STRESS-RIPENING PROTEIN 5 1 249 IPR003496 -
Cone4ag1489 250 MobiDBLite consensus disorder prediction 224 250 - -
Cone4ag1489 250 MobiDBLite consensus disorder prediction 1 151 - -
Cone4ag1489 250 Pfam ABA/WDS induced protein 163 240 IPR003496 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1489 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1489 Cone-Chr4:11648828 Cone7ag1455 Cone-Chr7:10282471 1.24E-37 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1361 Blo01g01731 Blo12g00782 . . . . Bma04g00376 Bma01g02510 . . . . . . . . . . . . . . . . . . . . . . . Cone4ag1489 Cone7ag1455 . . . . . . . . Bda11g00871 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0029816 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2