Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1504 ATGGGTCGGAAGAAGCCTACTGCTCGGGACGACGATAAGGCCCCTGTGGCAGCTCAGGGCGGTGGAAAATCAAAGAAGAAATCTCACTTGATAGATGATGACGAGTATGCCATTGGGACTGAATTATCTGAGGAGTCTCAGGTTCAAGAAAAGAAGGTTGTGAATACAGGCAAAAAGAAGGGTAACTCTAAATCTTCTTCAGAGCACAAAGACGATGAAGAGGATGAAGATGATGATGTTCCTGAAATTGTTATCACTGGGAAGAAGAAGGGTAAGTCCAAGAAGGGCGGAGGAGGGAATAGCATGTCTAGCATATCGAGTTTTGGGTTGCTTGAGGATGAGGAAAAAGATGGTGATGTTGTTGATGACGAGGATGATCAAGAATCTAAAGAAGATGACAATGAAGAAGATGCTCCTGTGGTGAGTTTTTCAGGGAAGAAGAAACCTTCTAAGTCTTCAAAAAAAGGTGGTAGTCTGTTTTCAGCATCAGCCTTTGATGCTATTGATGATGAGGATGGTGGAGAGATAATTGATAATGAGAGTAAAGTGGAGGAACAAAATGATGATGAGCCCGTCATATGTTTTACGGGGAAGAAGAAGTCATCTAATGGTGGCAAGAAGGGTGGTGCTTTTTCGGCATCAAGTTTTGGCGCGCTTAACGAAGCTGAGATTGAGGATAAGGATGAGGAAAAAGATGATGATGAAGATGTTCCTCCAATTAGTTTTTCTGGTAAGAAAAAGAAATCCACTTCAAAGAAGAATGGCGTTTCATCTAGCGTTGCATTTATGGGTGAGGAAAATGATGAGGATGCATCCATATCAGAACCAAGTAGAGTAGGTGATGATTTGGAGCCCACAGTTATTGCATTTTTGGGTAAGAAGAAGTCTTCTAGGAAGAAAAGTAGTAGTGTCTTTACCGCCTCGAGTGATGAGTCTGGACTCAGGAATGAACTCAGAGATGTCACAGAACCTGAAATACCAAGTGGTGAAAGTGGTAGAAATGATATTGATACTTCTAAAACGAATAAAACTGATGAGGTAGCAGAGACTTCAAAAAGTAAAAAGAAGAAGAAGAAGGGTGGGAGAACAGCCCAAGAAGAAGATGATTTGGACAAGATTCTTGCAGAGCTTGGTGAGGGGACTGCTGCCCCTTCTGCCCCTCCTCCTCAAGAAGTGAAAGACGAGGTTCATCCTGAACCTGTTGCTCCAGTTATTGCTGCGGCTGAAAAGGAAGGTGAAGAAGAAAGTGTGGAGTCTGCTGCAGCTAAGAAGAAGAAAAAGAAGAAGGAGAAGGAAAAGGAGAAAAAGGCTGCAGCTTCAGCAGCTGCTACTGCGGTTGAGGAGAAGGATGAAAAGGTGGAGGAATTGGAGACAGAAACCACAGAATCCAAGAAAGGTGCTGCTAAGGGAAAAGCAGCTGTGAAGAAGGTGCCAAAGCATGTTAAGGAGATGCAAGAGGCAATTGCTAGGAGGAAAGAAGAGGAGGAGAGGAAGAAAAGGGAAGAAGAAGAGAAGTTGAGGAAAGAAGAAGAGGAGAAGCATAGACTAGAAGAGCTTGAGCGGCAAGCAGAAGAGGCTAAGCGCAGGAAAAAGGAAAAAGAAAAGGAGAAGAAACTAAAACTGAAGCAGGAGGGAAAGTTATTGACAGGAAAGCAAAAGGAAAACCAACGTAAGATAGAGGCAATAAGAAACCAATTCCTTGCGAATTCTGGGGGTCTACCTCTGCCTGCTGTAGACCTTAGTGCACCAACAAAACGACCCATATATCAGACCAAGAAAACAAAAGCAGCACATCATCAAGCAAATGTTGCTGGCTCGTCGAAAGTTGTGGAGAAGGTAGAAGAAAAGGATAACCAGAATGAAAGTGTGGCAGAGGTTGATCCTTTGGAAGCTGAGAAGATTGAAGAAGTGGAGTCAATGAATGTGGAGGAGAAATCAGAAGTTTCTGAGGCTGTTGAAGAGAATGGGATGGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGATGAATGGGATGCAAAGAGTTGGGATGATGCTGATGTTAATTTATCTCTGAAAAGTTCATTTGCCGATGAAGAGGCTGAATCGGAGCCTGAGTCCATGGTCAAAAAAGAGAAAAAGACAGGAGCACCAACTTCCCGTAATGTAGCTCCTGCCTCTAAGTCAGTAAAATCTAAAGATGTGAATAATAGTAAAAAACAGCCTGAGGTGGAAGTTTCTGATAAAAACAGAAGGAAAAATTCTGTCCTTAAGACGGACGCTCCAAGTTCAGACTCTCCTCCCACCATCAAGGGAGAAGACAATCTCCGTTCTCCTATATGCTGTATTATGGGCCATGTTGATACTGGTAAAACCAAGCTGCTGGATTGTATCCGAGGTACTAATGTTCAGGAAGGTGAGGCTGGAGGTATTACACAACAGATTGGTGCAACTTATTTTCCAGCAGAGAACATCCGTGAAAGAACCAAGGAGCTAAAAGCTGATGCAAAGCTGAAAGTCCCAGGTCTTCTTGTTATTGATACTCCGGGCCACGAATCCTTCACAAACCTACGTTCTCGGGGTTCTGGTCTTTGTGACATTGCAATTTTGGTAGTCGATATCATGCATGGATTAGAGCCACAAACTATTGAATCCCTCAACCTCTTGAGAATGAGAAACACCGAATTCATAGTCGCTTTAAATAAGGTGGATCGACTCTATGGGTGGAAAGTGTGCCGTAATGCACCGATTGTGAAGGCAATGAAGCAGCAAACCAAAGATGTCCAAAATGAGTTCAATATGAGGCTAACTCAGATTATCACAGAATTCAAAGAACAAGGGTTAAATACTGAATTGTACTATAAAAATAAAGAAATGGGGGAAACCTTCAGTATAGTTCCTACAAGTGCTATTAGTGGTGAAGGCATTCCGGATTTGTTGTTATTACTGGTTCAGTGGACACAAAAAACTATGGTTGACAAGCTTTTATATAGTGATGAAGTGCAGTGTACAGTTTTGGAGGTTAAAGTTGTTGAAGGTCATGGGACAACCATTGATGTCGTACTAGTTAACGGTGTACTCCATGAAGGAGATCAAATAGTTGTTTGTGGAATGCAGGGTCCAATCGTTGCCTCAATCCGGGCATTGCTGACACCCCACCCAATGAAAGAACTTCGAGTTAAGGGTACGTATCTGCATCATAAGGAAATCAAGGCCGCTCAGGGTATCAAGATTACAGCCCAGGGACTTGAGCATGCTATTGCTGGCACTGGTCTTTATGTGGTGGGTCCTGATGATGACTTGGAAGATATCAAGGAATCAGCTATGGAAGATATGAAGTCAGTCCTGAACAGGATCGACAAAAGCGGAGAAGGAGTTTGTGTGCAGGCATCTACACTAGGTTCCTTAGAAGCATTGCTAGAGTTTTTGAAGTCCCCAGCAGTGAGAATTCCTGTTAGTGGCATAAGCATTGGCCCTGTACATAAAAAGGATGTAATGAAGGCTAGTGTAATGCTCGAAAAGAAGAAGGAATATGCAACTATCTTGGCGTTTGATGTCAAAGTAACCCCTGAGGCGCGGGAGCTAGCTGATGAACTGGGTGTGAGGATCTTTACTGCTGATATCATTTATCACCTGTTCGATCAATTCAAGGCCTATATTGATAATCTCAGAGAGGAAAAGAAAAGGGAAGCTGCTGATGAAGCAGTCTTCCCATGTGTCCTCAAGATTTTACCAAACTGTGTTTTCAACAAGAAAGATCCGATTGTGTTGGGGGTTGATGTACTGGAAGGCATAGCAAAGGTTGGGACTCCCATATGTATTCCTCAAAGGGAGTTTATTGATATTGGCCGCATTGCATCTATTGAAAATAACCACAAACCAGTTGATATAGCAAAGAAAGGACAGAAAGTCGCGATTAAGATTGTTGGGTCCTCTCCTGAAGAGCAGCAAAAGATGTTTGGCAGGCATTTTGAGATCGAGGATGAACTTGTCAGCCACATCTCAAGGAGCTCGATTGACGTTCTTAAAGCCAATTACCGGGATGATTTATCAAATGAGGAATGGAAGCTGGTTGTGAAATTGAAGAGTCTCTTCAAGATACAATGA 4086 42.83 MGRKKPTARDDDKAPVAAQGGGKSKKKSHLIDDDEYAIGTELSEESQVQEKKVVNTGKKKGNSKSSSEHKDDEEDEDDDVPEIVITGKKKGKSKKGGGGNSMSSISSFGLLEDEEKDGDVVDDEDDQESKEDDNEEDAPVVSFSGKKKPSKSSKKGGSLFSASAFDAIDDEDGGEIIDNESKVEEQNDDEPVICFTGKKKSSNGGKKGGAFSASSFGALNEAEIEDKDEEKDDDEDVPPISFSGKKKKSTSKKNGVSSSVAFMGEENDEDASISEPSRVGDDLEPTVIAFLGKKKSSRKKSSSVFTASSDESGLRNELRDVTEPEIPSGESGRNDIDTSKTNKTDEVAETSKSKKKKKKGGRTAQEEDDLDKILAELGEGTAAPSAPPPQEVKDEVHPEPVAPVIAAAEKEGEEESVESAAAKKKKKKKEKEKEKKAAASAAATAVEEKDEKVEELETETTESKKGAAKGKAAVKKVPKHVKEMQEAIARRKEEEERKKREEEEKLRKEEEEKHRLEELERQAEEAKRRKKEKEKEKKLKLKQEGKLLTGKQKENQRKIEAIRNQFLANSGGLPLPAVDLSAPTKRPIYQTKKTKAAHHQANVAGSSKVVEKVEEKDNQNESVAEVDPLEAEKIEEVESMNVEEKSEVSEAVEENGMDEEEEEEEEEEDEWDAKSWDDADVNLSLKSSFADEEAESEPESMVKKEKKTGAPTSRNVAPASKSVKSKDVNNSKKQPEVEVSDKNRRKNSVLKTDAPSSDSPPTIKGEDNLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLRMRNTEFIVALNKVDRLYGWKVCRNAPIVKAMKQQTKDVQNEFNMRLTQIITEFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDLLLLLVQWTQKTMVDKLLYSDEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVVCGMQGPIVASIRALLTPHPMKELRVKGTYLHHKEIKAAQGIKITAQGLEHAIAGTGLYVVGPDDDLEDIKESAMEDMKSVLNRIDKSGEGVCVQASTLGSLEALLEFLKSPAVRIPVSGISIGPVHKKDVMKASVMLEKKKEYATILAFDVKVTPEARELADELGVRIFTADIIYHLFDQFKAYIDNLREEKKREAADEAVFPCVLKILPNCVFNKKDPIVLGVDVLEGIAKVGTPICIPQREFIDIGRIASIENNHKPVDIAKKGQKVAIKIVGSSPEEQQKMFGRHFEIEDELVSHISRSSIDVLKANYRDDLSNEEWKLVVKLKSLFKIQ 1361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11694928 11701008 + Conep04aG0155600.1 Cone4ag1504 436482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1504 1361 MobiDBLite consensus disorder prediction 1 555 - -
Cone4ag1504 1361 CDD aeIF5B_II 993 1103 - -
Cone4ag1504 1361 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1094 1223 IPR036925 -
Cone4ag1504 1361 Gene3D Translation factors 1224 1361 - -
Cone4ag1504 1361 MobiDBLite consensus disorder prediction 45 70 - -
Cone4ag1504 1361 MobiDBLite consensus disorder prediction 591 768 - -
Cone4ag1504 1361 MobiDBLite consensus disorder prediction 445 469 - -
Cone4ag1504 1361 Pfam Translation-initiation factor 2 1098 1210 IPR023115 -
Cone4ag1504 1361 MobiDBLite consensus disorder prediction 336 353 - -
Cone4ag1504 1361 CDD IF2_eIF5B 772 982 - -
Cone4ag1504 1361 FunFam Eukaryotic translation initiation factor 5B 763 991 - -
Cone4ag1504 1361 FunFam eukaryotic translation initiation factor 5B 992 1111 - -
Cone4ag1504 1361 MobiDBLite consensus disorder prediction 408 425 - -
Cone4ag1504 1361 Coils Coil 410 459 - -
Cone4ag1504 1361 MobiDBLite consensus disorder prediction 168 185 - -
Cone4ag1504 1361 MobiDBLite consensus disorder prediction 477 555 - -
Cone4ag1504 1361 PRINTS GTP-binding elongation factor signature 889 898 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cone4ag1504 1361 PRINTS GTP-binding elongation factor signature 773 786 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cone4ag1504 1361 PRINTS GTP-binding elongation factor signature 837 847 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cone4ag1504 1361 PRINTS GTP-binding elongation factor signature 853 864 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cone4ag1504 1361 MobiDBLite consensus disorder prediction 690 710 - -
Cone4ag1504 1361 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 769 985 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cone4ag1504 1361 FunFam Eukaryotic translation initiation factor 5B 1111 1217 - -
Cone4ag1504 1361 Pfam Elongation factor Tu domain 4 1231 1304 IPR029459 -
Cone4ag1504 1361 SUPERFAMILY Translation proteins 1228 1360 IPR009000 -
Cone4ag1504 1361 CDD IF2_aeIF5B_IV 1232 1327 - -
Cone4ag1504 1361 MobiDBLite consensus disorder prediction 609 652 - -
Cone4ag1504 1361 Coils Coil 634 670 - -
Cone4ag1504 1361 Gene3D Translation factors 992 1110 - -
Cone4ag1504 1361 Gene3D - 1111 1216 IPR036925 -
Cone4ag1504 1361 MobiDBLite consensus disorder prediction 115 135 - -
Cone4ag1504 1361 Gene3D - 763 991 IPR027417 -
Cone4ag1504 1361 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 491 1360 IPR015760 GO:0003743(PANTHER)|GO:0005737(PANTHER)|GO:0005739(PANTHER)|GO:0006413(PANTHER)
Cone4ag1504 1361 NCBIfam small GTP-binding protein domain 774 898 IPR005225 GO:0005525(InterPro)
Cone4ag1504 1361 Coils Coil 481 544 - -
Cone4ag1504 1361 FunFam Eukaryotic translation initiation factor 5B 1224 1361 - -
Cone4ag1504 1361 MobiDBLite consensus disorder prediction 653 675 - -
Cone4ag1504 1361 MobiDBLite consensus disorder prediction 726 751 - -
Cone4ag1504 1361 Pfam Elongation factor Tu GTP binding domain 772 981 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cone4ag1504 1361 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 769 1060 IPR027417 -
Cone4ag1504 1361 MobiDBLite consensus disorder prediction 360 375 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1504 Cone-Chr4:11694928 Cone6ag0829 Cone-Chr6:4243112 7.97E-31 dispersed
Cone4ag1504 Cone-Chr4:11694928 Cone6ag0291 Cone-Chr6:1336207 1.04E-26 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1504 K03243 - csv:101204360 1541.55