Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1505 ATGGCATCCAGTCATCAAACTTCCTTCCAAAATGGTAAATTCAACCCTCCGAACGACCTCGAGCAACAACAAATTGCCACCCAGCCTGAAGAAGAATTAAACTACTTGAAACGGGCCCAATGGCTTCGGGCGGCAGTCCTAGGTGCCAACGATGGGCTCGTCTCCACTGCATCACTAATGATAGGTGTTGGAGCCGTTAAACAAGACGTCAAGGCCATGATACTCACCGGTTTTGCTGGTCTAGTAGCTGGGGCTTGTAGCATGGCCATTGGAGAGTTCGTTTCTGTTTACGCACAATTGGACATAGAGCTGGCACAGCTGAAGAGAGAGAAAGAGAGAAGAGGGAAAAGCGATGAAGAGGAGGAGGGAGAGAGGGAAAGTTTTCCGAATCCGTTGCAAGCCTCGGCTGCATCGGCTTTGACTTTTTCGGTGGGAGCAATGGTGCCATTACTAGCCGCGTCGTTTATAAGAGACTATAAGGTGAGGGTTGGGGTGGTGGTGGGAGCAGTGACCTTGGCTTTGATGGTGTTTGGATGGTTAGGGGCTATGTTGGGGAATGCACCTAAGGTTCAATCCTTGTTTAGGGTTTTGGTCGGGGGGTGGTTTGCTATGGCTATAACCTTTGGGTTAACCAAGTTGATTGGCTCCAGTGGGCTTTGA 660 50.0 MASSHQTSFQNGKFNPPNDLEQQQIATQPEEELNYLKRAQWLRAAVLGANDGLVSTASLMIGVGAVKQDVKAMILTGFAGLVAGACSMAIGEFVSVYAQLDIELAQLKREKERRGKSDEEEEGERESFPNPLQASAASALTFSVGAMVPLLAASFIRDYKVRVGVVVGAVTLALMVFGWLGAMLGNAPKVQSLFRVLVGGWFAMAITFGLTKLIGSSGL 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11702118 11702777 - Conep04aG0155700.1 Cone4ag1505 436483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1505 219 MobiDBLite consensus disorder prediction 110 127 - -
Cone4ag1505 219 MobiDBLite consensus disorder prediction 1 20 - -
Cone4ag1505 219 Pfam VIT family 124 211 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cone4ag1505 219 Pfam VIT family 42 122 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cone4ag1505 219 CDD Nodulin-21 40 189 - -
Cone4ag1505 219 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 18 216 IPR008217 GO:0005381(PANTHER)|GO:0005384(PANTHER)|GO:0005384(InterPro)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(PANTHER)|GO:0030026(InterPro)
Cone4ag1505 219 MobiDBLite consensus disorder prediction 110 131 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1505 Cone-Chr4:11702118 Cone8ag0963 Cone-Chr8:9112981 6.34E-77 dispersed
Cone17ag0789 Cone-Chr17:6104243 Cone4ag1505 Cone-Chr4:11702118 4.92E-75 wgd
Cone20ag0384 Cone-Chr20:1797722 Cone4ag1505 Cone-Chr4:11702118 2.02E-94 wgd
Cone4ag1505 Cone-Chr4:11702118 Cone7ag1445 Cone-Chr7:10230273 6.04E-124 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1505 K22736 - gmx:100815165 280.796