Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1549 ATGGCCGCCTTAACGCCTGATTCCATCCCACAAATCATTCAATTGGTTCAAGCAACTCCATTTGCGAGCTCTGTTGCTATAGGAGGTCTCTCTTTGTCCCTGTTTTTGCTTCTGAAAGCATCTACATCTACTCGCAAGAAGGGCCACTGCAAACTCCCTCCTGTTCCTGCGGTCCCTGGTGTGCCACTGCTAGGGAATCTGCTGCAGCTGAAGGAGAAAAAACCCCATAAGACGTTTACCAGATGGGTCGACACTTATGGGCCCATTTACTCCATCAGAACCGGAGCTTCCATCGTTATTGTTCTCAATTCCACCGACGTTGCGAAGGAGGCCTTGGTGACTAGGCACTCGTCTATCTCGACCAGAAAGCTAAACAATGCTCTAACCATTCTGACTAATGATAAGTGCATGGTTGCTATGAGTGACTACAATGACTTTCACAAGACAGTCAAACGACATATTCTTACTAATGTTCTCGGTCCAAGTGCTCAGAAACGACATAGATGCCACAGAGATGTCATGTTGGAAAACATCTCGATTCGAGTGCATGCTCATGCGACAAGCCACTCTCAATCTGAAGCTCTTAATTTTAGAGATATATTCGAGTCTGAACTCTTTGGATTAGCATTGAAAGAGGCATTAGGGAAGGATATAGAATCAGTATATGTAGAAGAGCTTGGAAAAACTTTTACAAGAGAAGATATGTTTCAAGTGTTAGTGCATGAGCAAATGGAAGGTGCAATAGAGGTTGATTGGAGAGATTTCTTTCCTTACTTCAAATGGATTCCTAATAACTCCATGGAGACCAAAATCAAGGGAATGGCATCTCGCCGGAACACATTAATGAAGAGCATCGTTGAGCAACGCAAGAACCAAATTGCTTCAGGACAGGAGTTGAACTCATGCTATCTGAATTTCTTGCTGTCTGAAGGAAAGACACTTACAGAAGATCAGATAAGTACTTTGGTTTGGGAGACAATTATTGAGGCTTCGGATACTAACATGGTTGTAACAGAATGGGCTATGTATGAGCTCGCTAAAAATCCACATCAGCAGGACCATCTGCTTCGAGAAATTCGAGACGTGTGTGGATTGGAAAAGCTTAAGGAGGAAGACATAAACAAGCTTCCATATCTGAGTGCTGTTTTTCATGAAACACTTAGAAGGCATAGTCCGGTTCCAGTCATTCCTCTGCGTTATGCACATGAAGATACCCAAATCGCAGGCTACCATATCCCTGCTGGAAGTGAGATTGCTATAAACATATACGGCTGCAACATGGACAAGGAGCAATGGGAAAGCCCAGAAGAGTGGAAGCCAGAGAGGTTTCTGGACGGGAAATATGATCCCATGGACTTGTACAAAACCATGGCGTTTGGAGGAGGGAAGAGAGTATGTGCAGGTTCTCTTCAGGCAATGTTGATTGCTTGTACCGCAATCGGGAAGTTGGTTCAAGAGTTCGAGTGGGGGTTGAATGTCGGAGAACACGACAGTGTCGACACTCATGGGCTTACTGGTCGGAAACAGGATCCATTACATCTTATTGTTAAGCCTAGAAATTAA 1563 44.21 MAALTPDSIPQIIQLVQATPFASSVAIGGLSLSLFLLLKASTSTRKKGHCKLPPVPAVPGVPLLGNLLQLKEKKPHKTFTRWVDTYGPIYSIRTGASIVIVLNSTDVAKEALVTRHSSISTRKLNNALTILTNDKCMVAMSDYNDFHKTVKRHILTNVLGPSAQKRHRCHRDVMLENISIRVHAHATSHSQSEALNFRDIFESELFGLALKEALGKDIESVYVEELGKTFTREDMFQVLVHEQMEGAIEVDWRDFFPYFKWIPNNSMETKIKGMASRRNTLMKSIVEQRKNQIASGQELNSCYLNFLLSEGKTLTEDQISTLVWETIIEASDTNMVVTEWAMYELAKNPHQQDHLLREIRDVCGLEKLKEEDINKLPYLSAVFHETLRRHSPVPVIPLRYAHEDTQIAGYHIPAGSEIAINIYGCNMDKEQWESPEEWKPERFLDGKYDPMDLYKTMAFGGGKRVCAGSLQAMLIACTAIGKLVQEFEWGLNVGEHDSVDTHGLTGRKQDPLHLIVKPRN 520
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 11927964 11930287 + Conep04aG0160100.1 Cone4ag1549 436527
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1549 520 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1549 520 PRINTS E-class P450 group I signature 107 128 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1549 520 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1549 520 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1549 520 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1549 520 PRINTS E-class P450 group I signature 83 102 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1549 520 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1549 520 SUPERFAMILY Cytochrome P450 50 519 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1549 520 Gene3D Cytochrome P450 43 517 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1549 520 FunFam Ent-kaurene oxidase 2 46 520 - -
Cone4ag1549 520 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 17 520 IPR044225 GO:0005506(InterPro)|GO:0005783(PANTHER)|GO:0009686(InterPro)|GO:0009686(PANTHER)|GO:0009707(PANTHER)|GO:0010241(PANTHER)|GO:0010241(InterPro)|GO:0016709(PANTHER)|GO:0020037(InterPro)|GO:0052615(InterPro)
Cone4ag1549 520 CDD CYP77_89 85 513 - -
Cone4ag1549 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone4ag1549 520 Pfam Cytochrome P450 58 501 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1549 Cone-Chr4:11927964 Cone19ag0648 Cone-Chr19:5546701 5.18E-48 dispersed
Cone4ag1549 Cone-Chr4:11927964 Cone7ag1403 Cone-Chr7:10045225 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1549 K04122 - mdm:103441571 691.034