Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone4ag1549 | ATGGCCGCCTTAACGCCTGATTCCATCCCACAAATCATTCAATTGGTTCAAGCAACTCCATTTGCGAGCTCTGTTGCTATAGGAGGTCTCTCTTTGTCCCTGTTTTTGCTTCTGAAAGCATCTACATCTACTCGCAAGAAGGGCCACTGCAAACTCCCTCCTGTTCCTGCGGTCCCTGGTGTGCCACTGCTAGGGAATCTGCTGCAGCTGAAGGAGAAAAAACCCCATAAGACGTTTACCAGATGGGTCGACACTTATGGGCCCATTTACTCCATCAGAACCGGAGCTTCCATCGTTATTGTTCTCAATTCCACCGACGTTGCGAAGGAGGCCTTGGTGACTAGGCACTCGTCTATCTCGACCAGAAAGCTAAACAATGCTCTAACCATTCTGACTAATGATAAGTGCATGGTTGCTATGAGTGACTACAATGACTTTCACAAGACAGTCAAACGACATATTCTTACTAATGTTCTCGGTCCAAGTGCTCAGAAACGACATAGATGCCACAGAGATGTCATGTTGGAAAACATCTCGATTCGAGTGCATGCTCATGCGACAAGCCACTCTCAATCTGAAGCTCTTAATTTTAGAGATATATTCGAGTCTGAACTCTTTGGATTAGCATTGAAAGAGGCATTAGGGAAGGATATAGAATCAGTATATGTAGAAGAGCTTGGAAAAACTTTTACAAGAGAAGATATGTTTCAAGTGTTAGTGCATGAGCAAATGGAAGGTGCAATAGAGGTTGATTGGAGAGATTTCTTTCCTTACTTCAAATGGATTCCTAATAACTCCATGGAGACCAAAATCAAGGGAATGGCATCTCGCCGGAACACATTAATGAAGAGCATCGTTGAGCAACGCAAGAACCAAATTGCTTCAGGACAGGAGTTGAACTCATGCTATCTGAATTTCTTGCTGTCTGAAGGAAAGACACTTACAGAAGATCAGATAAGTACTTTGGTTTGGGAGACAATTATTGAGGCTTCGGATACTAACATGGTTGTAACAGAATGGGCTATGTATGAGCTCGCTAAAAATCCACATCAGCAGGACCATCTGCTTCGAGAAATTCGAGACGTGTGTGGATTGGAAAAGCTTAAGGAGGAAGACATAAACAAGCTTCCATATCTGAGTGCTGTTTTTCATGAAACACTTAGAAGGCATAGTCCGGTTCCAGTCATTCCTCTGCGTTATGCACATGAAGATACCCAAATCGCAGGCTACCATATCCCTGCTGGAAGTGAGATTGCTATAAACATATACGGCTGCAACATGGACAAGGAGCAATGGGAAAGCCCAGAAGAGTGGAAGCCAGAGAGGTTTCTGGACGGGAAATATGATCCCATGGACTTGTACAAAACCATGGCGTTTGGAGGAGGGAAGAGAGTATGTGCAGGTTCTCTTCAGGCAATGTTGATTGCTTGTACCGCAATCGGGAAGTTGGTTCAAGAGTTCGAGTGGGGGTTGAATGTCGGAGAACACGACAGTGTCGACACTCATGGGCTTACTGGTCGGAAACAGGATCCATTACATCTTATTGTTAAGCCTAGAAATTAA | 1563 | 44.21 | MAALTPDSIPQIIQLVQATPFASSVAIGGLSLSLFLLLKASTSTRKKGHCKLPPVPAVPGVPLLGNLLQLKEKKPHKTFTRWVDTYGPIYSIRTGASIVIVLNSTDVAKEALVTRHSSISTRKLNNALTILTNDKCMVAMSDYNDFHKTVKRHILTNVLGPSAQKRHRCHRDVMLENISIRVHAHATSHSQSEALNFRDIFESELFGLALKEALGKDIESVYVEELGKTFTREDMFQVLVHEQMEGAIEVDWRDFFPYFKWIPNNSMETKIKGMASRRNTLMKSIVEQRKNQIASGQELNSCYLNFLLSEGKTLTEDQISTLVWETIIEASDTNMVVTEWAMYELAKNPHQQDHLLREIRDVCGLEKLKEEDINKLPYLSAVFHETLRRHSPVPVIPLRYAHEDTQIAGYHIPAGSEIAINIYGCNMDKEQWESPEEWKPERFLDGKYDPMDLYKTMAFGGGKRVCAGSLQAMLIACTAIGKLVQEFEWGLNVGEHDSVDTHGLTGRKQDPLHLIVKPRN | 520 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 11927964 | 11930287 | + | Conep04aG0160100.1 | Cone4ag1549 | 436527 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone4ag1549 | 520 | PRINTS | E-class P450 group I signature | 380 | 398 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1549 | 520 | PRINTS | E-class P450 group I signature | 107 | 128 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1549 | 520 | PRINTS | E-class P450 group I signature | 421 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1549 | 520 | PRINTS | E-class P450 group I signature | 466 | 489 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1549 | 520 | PRINTS | E-class P450 group I signature | 456 | 466 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1549 | 520 | PRINTS | E-class P450 group I signature | 83 | 102 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1549 | 520 | PRINTS | E-class P450 group I signature | 338 | 364 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1549 | 520 | SUPERFAMILY | Cytochrome P450 | 50 | 519 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1549 | 520 | Gene3D | Cytochrome P450 | 43 | 517 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1549 | 520 | FunFam | Ent-kaurene oxidase 2 | 46 | 520 | - | - | |
| Cone4ag1549 | 520 | PANTHER | ENT-KAURENE OXIDASE, CHLOROPLASTIC | 17 | 520 | IPR044225 | GO:0005506(InterPro)|GO:0005783(PANTHER)|GO:0009686(InterPro)|GO:0009686(PANTHER)|GO:0009707(PANTHER)|GO:0010241(PANTHER)|GO:0010241(InterPro)|GO:0016709(PANTHER)|GO:0020037(InterPro)|GO:0052615(InterPro) | |
| Cone4ag1549 | 520 | CDD | CYP77_89 | 85 | 513 | - | - | |
| Cone4ag1549 | 520 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 459 | 468 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone4ag1549 | 520 | Pfam | Cytochrome P450 | 58 | 501 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone4ag1549 | Cone-Chr4:11927964 | Cone19ag0648 | Cone-Chr19:5546701 | 5.18E-48 | dispersed | |
| Cone4ag1549 | Cone-Chr4:11927964 | Cone7ag1403 | Cone-Chr7:10045225 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone4ag1549 | K04122 | - | mdm:103441571 | 691.034 |