Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag1555 | ATGACGGTTCCCGGCGAGCCTGCTACGTCCGTAGCGCAGAAATCTTCTCTATACCAAAGAGTTTCGGATTCTAAATTCTCGCTGAACCTTCCAGAACCTCAAAGGAAGCTCACCAGGCAGAGGAAGCTCAGGTACCTTACTCATAAGGAGGCTGGCTTATTTTCCACTCAGCAACCTCTTCCGTCTCCGAGTTCTCCTCCCATTGCCGCCGATCACTGGTCCTCGGTAGCGATACCGCAACCTCTGCCGCTCCCTGATTTGTGTTGGATTAGGAGAGTCGCGTCAGCCGCTTCGACTTCCACTTCGGGACAAGGTCATACTCTATCGCCGAAAGGAACTACAAGGAGGAATGGGGAAACTGTAAAGAGTTCAACTAAGATTTTGAGTACCTTTCAAAATAAATTTTCTAAAGAGGACAATGGAGGAGGAAATGTTGATTTCAAGTTAAGATTGTGGTTGACTTCTGTAAAGGCTGTAGCAAGTGGTTCATCAAGTCTATCTAATAGCCCAAAGAGATCAAACACTGAGGAATTTTTTCACTCTTATGTTCCTACAAATTCATCAAAATGCTATAAAAACAGTGATAGAGGACCCTTACAAGATGTAAACCATGAAGGGGAACGATGTAAGTTAACACTGAATGTCTCGGTAAGGAGTGCTCCGACAAGTGCTCTACCAAGCCCGACTCGTAGTCCACAAGGATCAAACACTAGAGATTGTTTCGGTACATGCATGGCTTCTCAAGAATATCCCGTTGGATCACCTGTAAAAGCTGCACACAGTTCAGATCAATCACCTCTTAGAAGCCCAACAGCTAGAAGTCCAAATCTAAACTCCAGATGTCCTAATGGAATTGTCGCACCAGAAAGCAGTTATCAAGCCAATATTGCTCACCCCTTGCCCCGTCCTCCTGGACCAAATATTCATAGTTTTAGGGAAAAGCCAAATGTTTCCTCATTGAAAGGCCAATGGCAGAAAGGAAAGCTTATTGGTCGTGGTGCATTTGGAAGTGTGTATCTTGCAACCAATCGAGAGACTGGAGCTTTATGCGCAATGAAGGAGGTTGACCTCATTCCTGATGACTCTAAATCTGCTGAATGTATAAAGCAATTGGAGCAGGAAATTAAAACACTGCATCAACTAAAGCATCAGAATATCGTGCAGTACTATGGGAGTGAAATAATTGATGATCATTTATATATATATTTGGAGTATATTTATCCTGGATCAATCAATAAATATGTCCGTGATCATCGTGGAGCTATTACAGAATGTGTAGTTCGCAATTTCACCCGCCATATTCTCTCTGGCTTGGCTTTCTTGCATGCCACAAAGACTATCCACAGGGACATTAAAGGGGCAAATTTGCTTGTTGATTCGGCAGGTGTTGTTAAGCTTGCTGATTTTGGGATGGCCAAAATTCTCACAGCACAATATGATCTATCTTTCAAGGGTAGTCCACACTGGATGGCTCCAGAGGTGATAAGGGCTGCAATGCAAAAAGAGACGAACCCCAATCACGCTTTTGCAGTAGATATATGGAGCTTAGGCTGTACTGTCATCGAGATGTTAAATGGAAAACCTCCTTGGAGTGAGTTTGAAGGGCCTCAAGCTATGTTCAAGGTCTTGAATAAAAGTCCGCCTATACCAGAAACATTATCTTCAGAAGGGAAGGACTTCCTCCATTGTTGCTTTCGAAGAAATCCGGCAGAGAGGCCCTCAGCGTCTAAGCTACTTGAGCACCCCTTTGTACAAAATGTTTCAGTAGCTTTCCATGCTTCTTCCTGTGCAACGAACTAA | 1800 | 43.78 | MTVPGEPATSVAQKSSLYQRVSDSKFSLNLPEPQRKLTRQRKLRYLTHKEAGLFSTQQPLPSPSSPPIAADHWSSVAIPQPLPLPDLCWIRRVASAASTSTSGQGHTLSPKGTTRRNGETVKSSTKILSTFQNKFSKEDNGGGNVDFKLRLWLTSVKAVASGSSSLSNSPKRSNTEEFFHSYVPTNSSKCYKNSDRGPLQDVNHEGERCKLTLNVSVRSAPTSALPSPTRSPQGSNTRDCFGTCMASQEYPVGSPVKAAHSSDQSPLRSPTARSPNLNSRCPNGIVAPESSYQANIAHPLPRPPGPNIHSFREKPNVSSLKGQWQKGKLIGRGAFGSVYLATNRETGALCAMKEVDLIPDDSKSAECIKQLEQEIKTLHQLKHQNIVQYYGSEIIDDHLYIYLEYIYPGSINKYVRDHRGAITECVVRNFTRHILSGLAFLHATKTIHRDIKGANLLVDSAGVVKLADFGMAKILTAQYDLSFKGSPHWMAPEVIRAAMQKETNPNHAFAVDIWSLGCTVIEMLNGKPPWSEFEGPQAMFKVLNKSPPIPETLSSEGKDFLHCCFRRNPAERPSASKLLEHPFVQNVSVAFHASSCATN | 599 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 11959759 | 11963132 | - | Conep04aG0160700.1 | Cone4ag1555 | 436533 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag1555 | 599 | SMART | serkin_6 | 324 | 584 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag1555 | 599 | FunFam | Mitogen-activated protein kinase kinase kinase 5 | 321 | 598 | - | - | |
Cone4ag1555 | 599 | MobiDBLite | consensus disorder prediction | 99 | 123 | - | - | |
Cone4ag1555 | 599 | MobiDBLite | consensus disorder prediction | 219 | 240 | - | - | |
Cone4ag1555 | 599 | ProSitePatterns | Protein kinases ATP-binding region signature. | 330 | 353 | IPR017441 | GO:0005524(InterPro) | |
Cone4ag1555 | 599 | ProSiteProfiles | Protein kinase domain profile. | 324 | 584 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag1555 | 599 | MobiDBLite | consensus disorder prediction | 258 | 279 | - | - | |
Cone4ag1555 | 599 | SUPERFAMILY | Protein kinase-like (PK-like) | 320 | 589 | IPR011009 | - | |
Cone4ag1555 | 599 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 50 | 586 | IPR050538 | - | |
Cone4ag1555 | 599 | Gene3D | Transferase(Phosphotransferase) domain 1 | 321 | 597 | - | - | |
Cone4ag1555 | 599 | MobiDBLite | consensus disorder prediction | 254 | 279 | - | - | |
Cone4ag1555 | 599 | Pfam | Protein kinase domain | 325 | 584 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag1555 | Cone-Chr4:11959759 | Cone8ag0112 | Cone-Chr8:570627 | 2.85E-140 | dispersed | |
Cone12ag0023 | Cone-Chr12:182913 | Cone4ag1555 | Cone-Chr4:11959759 | 1.46E-93 | wgd | |
Cone4ag1555 | Cone-Chr4:11959759 | Cone6ag1378 | Cone-Chr6:11065392 | 1.58E-113 | wgd | |
Cone4ag1555 | Cone-Chr4:11959759 | Cone7ag1397 | Cone-Chr7:10015837 | 7.37E-305 | wgd | |
Cone4ag1555 | Cone-Chr4:11959759 | Cone8ag0019 | Cone-Chr8:140232 | 1.63E-93 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82797 | None | None | None | None | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag1555 | - | - | - | 0.0 |