Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag1586 | ATGTCCAACTATTCCTTCTTAAACGACCAGCTCTCAAAGCGAACGTCAATTTTCGGATTACGCTTATGGGTTGTTCTGGGCATATGCGTGGGAACAGCCATAGTCCTTGTCCTCTTCCTAATCTCCCTCTGGTTCACTTCTCGCCGCAACAATTCCTCTAAACCTAAAAACCCCTCTCGTCAAAACACCTCCACTATTCCAAACGTTTCCAAGGAAATCCAAGAAATCCAAATCGACCCTTCTCTCCACACTTCTAACCCGGACCCGAAGACCCAATTAGTCCCCCAATCCGACCCGCATCCAGAAACAGAGCCCCTAGCCTTGCTTCTTCAGGCAGAGGAAGAAAGCCTAGTGGTTGGGCGTAATAGAATACACATAGAAATTGGAAAGGATCACCGAATTTCTTACCCTGAGCATGGAGGTGGATCATCGCATGGCAGCGGAGAAGCTCGCCTCGGTGATCAGACGGGGATTGCTGCGCCGGAAGTTTCTCATTTGGGGTGGGGCCATTGGTACACCCTTAGAGAGCTAGATGTCGCTACAAATGGGTTTGCCGATGAGAGTGTGATTGGTGAAGGTGGGTATGGAATTGTTTACCGTGGCGTTTTTGAAGATAACAGTAATGTTGCCGTCAAGAATTTGCTCAACAACAGGGGACAAGCTGAGAGGGAGTTTAAGGTCGAGGTTGAAGCAATCGGACGTGTTCGACATAAAAATTTAGTGAGATTGCTTGGTTATTGTGCTGAAGGAGCTCATAGGATGCTTGTTTACGAGTATGTTGACAATGGAAACTTGGAACAATGGCTTCATGGAGATGTTGGGCCTTGCAGCCCACTTACATGGGATATCCGTATTAATATAATACTGGGCACTGCAAAAGGGCTGGCATACTTGCACGAGGGGCTTGAGCCTAAGGTTGTTCACCGGGATATTAAGTCAAGTAACATCTTGCTCGATAGACAATGGCATCCAAAAGTTTCAGACTTTGGCCTAGCAAAGCTTCTAGGCTCGGAGATGAGCTATGTGACTACTCGTGTCATGGGAACATTTGGATATGTAGCTCCAGAATATGCCAGTACTGGCATGTTAAACGAAAGAAGCGATGTGTATGGTTTTGGGATTCTCATTATGGAGATAATTTCTGGTAGAAATCCCGTGGATTATAATCGCCCTACTGGAGAGGTGAACCTAGTGGAGTGGCTTAAGACAATGGTTACAAATAGGAATGCAGAGGGGGTTCTGGATCCAAAGTTGCCCGAAAAGCCTTCTTCGAGAGCACTCAAGCGGGTTCTTTTAGTAGCTTTACGTTGTGTGGACCCGAATGCACAAAAGAGGCCGAAGATGGGGCATGTCATACATATGCTTGAAGCCGATGAGTTTCCTTTTCGAGATGACCGGAGAGGAGGGAGAGAACAGGGCCAGTCACAACGTGAAAGGTCTCAAGGGCAAGCTAATGGCCAGGCTGGTGAGTGA | 1473 | 47.32 | MSNYSFLNDQLSKRTSIFGLRLWVVLGICVGTAIVLVLFLISLWFTSRRNNSSKPKNPSRQNTSTIPNVSKEIQEIQIDPSLHTSNPDPKTQLVPQSDPHPETEPLALLLQAEEESLVVGRNRIHIEIGKDHRISYPEHGGGSSHGSGEARLGDQTGIAAPEVSHLGWGHWYTLRELDVATNGFADESVIGEGGYGIVYRGVFEDNSNVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPCSPLTWDIRINIILGTAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWHPKVSDFGLAKLLGSEMSYVTTRVMGTFGYVAPEYASTGMLNERSDVYGFGILIMEIISGRNPVDYNRPTGEVNLVEWLKTMVTNRNAEGVLDPKLPEKPSSRALKRVLLVALRCVDPNAQKRPKMGHVIHMLEADEFPFRDDRRGGREQGQSQRERSQGQANGQAGE | 490 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 12122766 | 12125324 | - | Conep04aG0163800.1 | Cone4ag1586 | 436564 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag1586 | 490 | Gene3D | Phosphorylase Kinase; domain 1 | 162 | 259 | - | - | |
Cone4ag1586 | 490 | ProSiteProfiles | Protein kinase domain profile. | 184 | 463 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag1586 | 490 | Gene3D | Transferase(Phosphotransferase) domain 1 | 260 | 466 | - | - | |
Cone4ag1586 | 490 | MobiDBLite | consensus disorder prediction | 459 | 490 | - | - | |
Cone4ag1586 | 490 | MobiDBLite | consensus disorder prediction | 50 | 102 | - | - | |
Cone4ag1586 | 490 | FunFam | Probable serine/threonine-protein kinase At1g01540 | 164 | 259 | - | - | |
Cone4ag1586 | 490 | CDD | STKc_IRAK | 190 | 456 | - | - | |
Cone4ag1586 | 490 | FunFam | Putative receptor-like serine/threonine-protein kinase | 260 | 470 | - | - | |
Cone4ag1586 | 490 | PANTHER | OS01G0323000 PROTEIN | 5 | 479 | IPR052232 | - | |
Cone4ag1586 | 490 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 306 | 318 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone4ag1586 | 490 | MobiDBLite | consensus disorder prediction | 459 | 474 | - | - | |
Cone4ag1586 | 490 | SUPERFAMILY | Protein kinase-like (PK-like) | 166 | 456 | IPR011009 | - | |
Cone4ag1586 | 490 | ProSitePatterns | Protein kinases ATP-binding region signature. | 190 | 212 | IPR017441 | GO:0005524(InterPro) | |
Cone4ag1586 | 490 | MobiDBLite | consensus disorder prediction | 50 | 98 | - | - | |
Cone4ag1586 | 490 | SMART | serkin_6 | 184 | 462 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag1586 | 490 | Pfam | Protein kinase domain | 186 | 453 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag1586 | 490 | MobiDBLite | consensus disorder prediction | 475 | 490 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag1169 | Cone-Chr10:8511197 | Cone4ag1586 | Cone-Chr4:12122766 | 4.18E-176 | dispersed | |
Cone3ag1161 | Cone-Chr3:30254998 | Cone4ag1586 | Cone-Chr4:12122766 | 4.81E-175 | dispersed | |
Cone4ag1586 | Cone-Chr4:12122766 | Cone8ag1197 | Cone-Chr8:10205338 | 5.44E-174 | dispersed | |
Cone17ag0849 | Cone-Chr17:6756706 | Cone4ag1586 | Cone-Chr4:12122766 | 5.31E-224 | wgd | |
Cone20ag0197 | Cone-Chr20:847514 | Cone4ag1586 | Cone-Chr4:12122766 | 1.22E-35 | wgd | |
Cone4ag1586 | Cone-Chr4:12122766 | Cone7ag1363 | Cone-Chr7:9883587 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82798 | PF04548 | AIG1 | 2.40E-79 | CL0023 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag1586 | - | - | - | 0.0 |