Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1623 ATGGAAAAGCTTCAATCAATCTCTAGCTACTCTGTTTTCTTTTACGCGTTTCTGCTTCTTCTGATTCTTGTATCAATGAAGGCAGCCTTCGCTTACTCAGCAGTGGAATCTCTTCCCGGATTTGAAGGACCTCTTCCTTTTCAACTTGAAACTGGATATGTGGGAGTAGGAGATTCAGAGGAAGTTCAGTTATTCTACTACTTTTTGAAGTCAGAGAGGGATCCTAAAGATGACCCTCTGATTCTTTGGCTCACCGGTGGGCCCGGTTGCTCCGCCCTTTCCGGTCCGTTGAATTTCAAGATGGAGCAGTACAATGGGACTGTGCCTAACTTGGTCTTGAACCCATATTCATGGACAAAGGCATCGAGTATCATATTTGTTGATTCACCAGTTGGGACTGGGTTCTCCTATGCAACTACATCACTTGGTTTTCAGACAAGCGATATCAAACAGATTGTTCAGGCCAACCAGTTTATCCGAAAGTGGCTGATTGATCATCCAGAATTCTCATCAAATCCAGTATATGTTGGTGGAGATTCATATTCCGGTCTTATTGTTCCTGGCGTTGTACAAGAAATCTTAAACGGAAACGAGCAAGGCAGTGTACCATTAGTGAATATCAGTGGATACTTGCTTGGTAACCCTATGACAGATTCAGCTTCGGATGGCAATTTCGCAATTCCATTTGTGCACGGAATGGGACTCATCTCTGATGAACTATATGAGTCATTGAAGAGGAATTGTGTAGGAGAGTACGTAATGGTCGATCCAGGTAATGTAGAGTGTTCGAGAGATCTTTCTGCATACCAAAAGAGTACTTCACTAATTAATACAGCACACATTTTGGAACCCTTTTGTGGCTATGCTTCTCCAACCCCACATCATATCTATAACACAAGATCTCTTTCTATCATCCCTAAAGGCAGCTTCCTTGACCCGGAGCCAGCTCCGACTCCTAAACTAGGCTGCCGTAATTATGGATATTTGCTTTCTCGGTATTGGGCTAACCATCAAGGTGTCCGTGAAGCTCTTCATATACGAGAGGGAAGTATAGGTGAATGGCAGAGATGCAATTATGGTTTGGCTTACACCATTGAAATATATAGTAGTTTTGAGTATCATGTCAACCTTAGTTTGAAAGGTGTCCCTGCTTTAATATACAGCGGGGATCACGACGCCGAAGTACCGTTTTTAGGCACTCAAGCGTGGATTAGATCTTTGAATTACTCCATTGTTGATGATTGGAGACCCTGGCTTGTTCAAGGCCAGGTTGCAGGTTACACAAGGAGTTATGCAAATCAAATGACATTTGCAACTGTTAAGGGAGGAGGGCACACAGCACCTGAATTCAAGCCCAGAGAAGCATATGCCATGTTCCAAAGGTGGATATCTGGTGAATCTCTGTAA 1407 43.28 MEKLQSISSYSVFFYAFLLLLILVSMKAAFAYSAVESLPGFEGPLPFQLETGYVGVGDSEEVQLFYYFLKSERDPKDDPLILWLTGGPGCSALSGPLNFKMEQYNGTVPNLVLNPYSWTKASSIIFVDSPVGTGFSYATTSLGFQTSDIKQIVQANQFIRKWLIDHPEFSSNPVYVGGDSYSGLIVPGVVQEILNGNEQGSVPLVNISGYLLGNPMTDSASDGNFAIPFVHGMGLISDELYESLKRNCVGEYVMVDPGNVECSRDLSAYQKSTSLINTAHILEPFCGYASPTPHHIYNTRSLSIIPKGSFLDPEPAPTPKLGCRNYGYLLSRYWANHQGVREALHIREGSIGEWQRCNYGLAYTIEIYSSFEYHVNLSLKGVPALIYSGDHDAEVPFLGTQAWIRSLNYSIVDDWRPWLVQGQVAGYTRSYANQMTFATVKGGGHTAPEFKPREAYAMFQRWISGESL 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12314381 12317553 - Conep04aG0167600.1 Cone4ag1623 436601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1623 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cone4ag1623 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cone4ag1623 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 435 448 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cone4ag1623 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cone4ag1623 468 FunFam Serine carboxypeptidase-like 11 29 468 - -
Cone4ag1623 468 Gene3D alpha/beta hydrolase 31 294 IPR029058 -
Cone4ag1623 468 SUPERFAMILY alpha/beta-Hydrolases 35 466 IPR029058 -
Cone4ag1623 468 Gene3D - 324 468 - -
Cone4ag1623 468 Pfam Serine carboxypeptidase 39 465 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cone4ag1623 468 FunFam Carboxypeptidase 371 465 - -
Cone4ag1623 468 FunFam Carboxypeptidase 322 467 - -
Cone4ag1623 468 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 462 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1623 Cone-Chr4:12314381 Cone8ag1069 Cone-Chr8:9700799 7.59E-165 dispersed
Cone17ag0714 Cone-Chr17:4974459 Cone4ag1623 Cone-Chr4:12314381 5.69E-120 transposed
Cone5ag0944 Cone-Chr5:4041034 Cone4ag1623 Cone-Chr4:12314381 1.61E-118 transposed
Cone10ag1056 Cone-Chr10:7350554 Cone4ag1623 Cone-Chr4:12314381 9.52E-132 wgd
Cone12ag1035 Cone-Chr12:8656140 Cone4ag1623 Cone-Chr4:12314381 3.55E-142 wgd
Cone4ag1623 Cone-Chr4:12314381 Cone8ag1066 Cone-Chr8:9685925 5.99E-127 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1623 K16296 - cit:102630827 612.453