Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1635 ATGGCTCCATTGTACAATTGGTGGGCAAAAGAGAGCCACAGAGGAACACCTGTGATTGTTAAAATGGAGAACCCAAACTGGTCCATGGTCGAGCTCGAAGGCCCCTCTGAAGACGACTTCCTTCTCTCCGATTCTTCTCCGTCGCGAACCAGAGATAAAGGCCGAGGCAAAAACGCTAAACAGCTTACTTGGGTCCTCCTCCTTAAAGCCCATAAAGCCGCCGGCTGTTTAACCTACATTGGCTCCGCATTGGTCGGACTCGCTTCCGCCGTCAAACGCCGTGTGGCCTCCGGCCGTACCGACACCGACAATGACAACGATACCAGCATTGGAGGTCGAGACAAGGAGAATCGGACCGTCAAGACTAGGTTTTACTCCTTCATTAAGGTTTTCCTCTTCTTGTCGGTGCTTCTGTTAGTGTTCGAGATCGCGGCTTATTTCGAAGGCTGGCATTTTGGGGCCCCTCAGCTGCAATGGGACTACTTATGGGCGACGCCGTTTGGTGTTAAGGATTTGTTCGATTGGATTTATTCTCAGTGGGTTTTGTTTAGGGTGGATTATCTTGCTCCCCCTCTGCAATTTCTCGCCAATGCTTGTATCATACTCTTCCTAATTCAGAGCTGCGATAGGCTTGTTCTCTGTATGGGTTGTTTCTGGATCCGATTTAAGAAGATCAAACCGGTCCCTAAAGAACGTGGCTTAGATCTTGAATCTGGAGAGAATGGCTACTTCCCTATGGTTCTTGTTCAGATCCCCATGTGTAATGAAAAGGAGGTTTATCATCAATCAATTGCTGCTGTCTGCAATTTAGACTGGCCGAAATCAAAGATATTGATTCAGGTTCTAGACGATTCGGATGACCCAACGACCCAAGTGTTGATCGAAGATGAGGTCCAAAAATGGCAGAAAGATGGGGCCCATATTGTGTACCGTCATAGAGTGATTAGAGACGGGTATAAAGCTGGTAATCTCAAATCTGCCATGAATTGTAGTTACGTCAAAGACTACGAATTCGTCACAATCTTTGATGCCGATTTCCAGCCCAATCCGGATTTCCTTAAAAAAACAGTCCCTCACTTCAAGGGTAATGAGGAATTGGGGCTGGTCCAAGCAAGATGGTCTTTTGTGAACAAGGACGAAAATTTGCTAACAAGACTGCAAAACATTAATCTAGCATTCCATTTCGAGGTAGAGCAGCAAGTAAATGGCGCTTTCCTTAATTTCTTTGGGTTTAATGGGACAGCTGGTGTTTGGCGGATTAAAGCTCTGGAAGAATCCGGCGGGTGGTTGGAGAGAACAACGGTAGAAGACATGGACATAGCTGTTAGAGCTCATCTTCATGGTTGGAAATTCATCTTTCTTAATGATGTCGAGTGTCAGTGTGAATTACCGGAATCTTATGAAGCTTATAGGAAACAGCAACATAGATGGCACTCCGGCCCGATGCAGTTATTTCGACTTTGTTTACCGGCTATAATAAAATCCAAGATTAGCATATGGAAGAAATTCAACATGATATTCCTCTTCTTTCTCCTTAGAAAGTTGATTCTCCCCTTCTATTCTTTCACACTCTTCTGCATAATTCTCCCCATGACAATGTTCGTTCCAGAAGCCCAGCTTCCAGCTTGGGTTGTCTGCTACATTCCGGCCACCATGTCCTTCCTCAACATCCTCCCTGCCCCTAAATCTTTCCCTTTCATTGTCCCTTACCTTCTGTTTGAAAACACCATGTCCGTTACTAAGTTCAATGCGATGGTTTCTGGGCTATTTCAGTTGGGGAGTGCTTATGAATGGGTAGTTACGAAAAAGTCCGGACGATCCTCCGAGGGTGATCTTGTAAATTTGATTGAAAAGGGGCCAAAGCCTCAAAGAGGGACGTCAGTGCCTGACCTTGAGGAAATGAAGGAAGAGATTAAAAAAGAGGAACGAAAGGCTTCTAGGAAGAAAAAACATAACAGGATATATACAAAGGAACTAGCTTTAGCTTTTCTTCTCCTAACGGCTTCAGCAAGGAGTTTGTTGTCTGCTCAGGGGATCCATTTCTACTTCTTGCTTTTTCAGGGCGTATCGTTTTTACTTGTTGGCTTGGATCTGGTCGGTGAACAAGTTGACTAG 2115 45.15 MAPLYNWWAKESHRGTPVIVKMENPNWSMVELEGPSEDDFLLSDSSPSRTRDKGRGKNAKQLTWVLLLKAHKAAGCLTYIGSALVGLASAVKRRVASGRTDTDNDNDTSIGGRDKENRTVKTRFYSFIKVFLFLSVLLLVFEIAAYFEGWHFGAPQLQWDYLWATPFGVKDLFDWIYSQWVLFRVDYLAPPLQFLANACIILFLIQSCDRLVLCMGCFWIRFKKIKPVPKERGLDLESGENGYFPMVLVQIPMCNEKEVYHQSIAAVCNLDWPKSKILIQVLDDSDDPTTQVLIEDEVQKWQKDGAHIVYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVTIFDADFQPNPDFLKKTVPHFKGNEELGLVQARWSFVNKDENLLTRLQNINLAFHFEVEQQVNGAFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAIIKSKISIWKKFNMIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAQLPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSAYEWVVTKKSGRSSEGDLVNLIEKGPKPQRGTSVPDLEEMKEEIKKEERKASRKKKHNRIYTKELALAFLLLTASARSLLSAQGIHFYFLLFQGVSFLLVGLDLVGEQVD 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12361036 12364396 - Conep04aG0168800.1 Cone4ag1635 436613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1635 704 Coils Coil 628 651 - -
Cone4ag1635 704 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 174 703 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
Cone4ag1635 704 MobiDBLite consensus disorder prediction 628 643 - -
Cone4ag1635 704 MobiDBLite consensus disorder prediction 618 649 - -
Cone4ag1635 704 Pfam Glycosyl transferase family group 2 339 544 IPR001173 -
Cone4ag1635 704 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 238 462 IPR029044 -
Cone4ag1635 704 FunFam probable xyloglucan glycosyltransferase 5 238 463 - -
Cone4ag1635 704 SUPERFAMILY Nucleotide-diphospho-sugar transferases 247 523 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1635 Cone-Chr4:12361036 Cone4ag1865 Cone-Chr4:13366518 1.78e-314 dispersed
Cone17ag0903 Cone-Chr17:7115534 Cone4ag1635 Cone-Chr4:12361036 0 wgd
Cone20ag0246 Cone-Chr20:1089883 Cone4ag1635 Cone-Chr4:12361036 0 wgd
Cone4ag1635 Cone-Chr4:12361036 Cone7ag1317 Cone-Chr7:9641464 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1635 - - - 0.0