Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1650 ATGGGAATTTGCATATCCTTTACGTCATCTTCTCATATCGACAGAACTGATCAGAGCAGTAATGAGTTGAAGGAACTGCTGTATGAAGAAGACAAGTCTCTGTTTAGTGGGATTTCTAAACTCGGTTCTGTCTGTTCCATGGGAGGAAAGAAAGGACCCAACCAGGATTCTGCTATCCTTAACGAGGATTATGGAATCGAAGATGGGGCGTTTTGTGGAGTATTTGATGGGCATGGGAAAAATGGTCATGTAGTGAGCAACTTAGTGAGAAACCGTCTTCCTTCGTTATTGCTGTCTCAGAAAAATGCTCTGCAAAATCTTAACACAGCGGCCATGGATGATTATTACGAAGAACATATTCATGATAGCAGAGACGAGGAGATAGTGCCCAGCAAGGAGTTTCATGAATGGAAAGAAGCCATTGTTAGTGCCTTCAAGGTGATGGATAAGGAGATTAAGGTTCAAGAAAGTCTAGATTGCTTATGTAGTGGGACCACAGCTGTAGTTGTTATAAAACAGGACGAAGATATTGTGATAGCCAATCTGGGTGATTCAAGGGCAGTGTTGGGGAGAATCACTGAAGATGGGATTAAAGCGATTCAATTAACCACTGATTTAAAGCCCGGATTACCCAATGAAGAAGATAGAATAAAGAGATGTAACGGTCGAGTTCTAGCAATAAAAGAAGAACCACATATACAGAGAGTATGGCTCCCAAATGAAGATTTTCCAGGTCTAGCCATGTCCAGAGCTTTTGGAGATTTCATCCTAAAGAACCACGGCGTAATCGCTGTACCTGATATCTCTTACCGCCGGCTCAATTCAAACGACCAATTCATTATTCTAGCAACTGATGGGGTGTGGGATGTGCTGACCAACAATCAAGTAGCGACCGCCGTGTGGGCAGCTGAGAATGAACATATGGCAGCAAAAGCGGTGGTGGAGGCAGCAAACGCCGCTTGGAGGAATAAATTTCCCAATGCTAAAGTGGATGATTGCACTGTAGTATGCCTCTTCTTACAAAACCAACGTGCCGTTGAAAAATGA 1047 43.17 MGICISFTSSSHIDRTDQSSNELKELLYEEDKSLFSGISKLGSVCSMGGKKGPNQDSAILNEDYGIEDGAFCGVFDGHGKNGHVVSNLVRNRLPSLLLSQKNALQNLNTAAMDDYYEEHIHDSRDEEIVPSKEFHEWKEAIVSAFKVMDKEIKVQESLDCLCSGTTAVVVIKQDEDIVIANLGDSRAVLGRITEDGIKAIQLTTDLKPGLPNEEDRIKRCNGRVLAIKEEPHIQRVWLPNEDFPGLAMSRAFGDFILKNHGVIAVPDISYRRLNSNDQFIILATDGVWDVLTNNQVATAVWAAENEHMAAKAVVEAANAAWRNKFPNAKVDDCTVVCLFLQNQRAVEK 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12437128 12438443 - Conep04aG0170300.1 Cone4ag1650 436628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1650 348 SUPERFAMILY PP2C-like 42 342 IPR036457 -
Cone4ag1650 348 PANTHER PROTEIN PHOSPHATASE 42 339 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone4ag1650 348 CDD PP2Cc 42 340 IPR001932 -
Cone4ag1650 348 Gene3D - 38 343 IPR036457 -
Cone4ag1650 348 Pfam Protein phosphatase 2C 113 317 IPR001932 -
Cone4ag1650 348 ProSiteProfiles PPM-type phosphatase domain profile. 41 340 IPR001932 -
Cone4ag1650 348 SMART PP2C_4 30 338 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0752 Cone-Chr4:4192648 Cone4ag1650 Cone-Chr4:12437128 3.56E-31 dispersed
Cone4ag1650 Cone-Chr4:12437128 Cone5ag0943 Cone-Chr5:4036801 2.73E-96 dispersed
Cone4ag1650 Cone-Chr4:12437128 Cone10ag1329 Cone-Chr10:10363256 3.76E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1650 - - - 0.0