Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1656 ATGTTGAGAATGTTAGCTTCCTCTGACCTCAGATTTTTCCTTGTTTGTTTCGGGGTATTGGTTTCTTCGCTCTCCTTCGCTGTTCCTCCACTCGCTGAGTCGGATCGATCTCTGCTCGTCAACGTGACTACCGAGTCAAATAATGCATCTGTCTCCAGGAACAAGGAAGGTAGCTTCGCAGACATAATCGATCGAGCTTTGGAGAATGAGTTCAAAGAGAGTGATCAGAATGAAGTTCCTGATGCCGGAAGCTTTAACAACAGCGTAGCAGAACAGCAGGCTGTTTTGGAAACTGTGGCCAGGGTTAAGACGAAGAAAAATGACACGAAGGAGGAGAAGTCATTTCAACTTCAAAATGTTTTCAATCTCGATAGTGATAACAGAGCAGAGGAAACACCAACATTGATAGATCGAAAGGACAACGTATTTATTATATCAAACTTCAAATCTAAATACCCAGTGCTCCAGCTAGACATAAGATTGATCTCAGATCTTGTAATTGTTATTGTATCTGCAACTTGTGGTGGCATTGCCTTTGCTTGTGCAGGACAGCCAGTCATCACTGGATATTTACTGTCAGGATCTATTGTTGGACCTGGTGGGTTTAACTTTGTTGGTGAAATGGTGCAAGTTGAAACCGTAGCTCAGTTTGGTGTAATTTTTCTTCTTTTTGCACTGGGCTTGGAGTTCTCCATAACAAAACTCCGAGTTGTCAGAGCAGTTGCTATTCTAGGAGGCCTGCTTCAAATCTTCCTATTTATGTGCCTCAGTGGAATCACAGCCTCGTTGTGTGGTGGAAAAGCTTCAGAGGGAGTATTTGTTGGCACATTCCTTTCAATGTCTTCTACAGCAGTGGTATTGAAGTTTTTGATGGAAAAAAATTCTACAAATGTTCTTCATGGCCAAGTCACCATTGGCACCCTTATCCTGCAGGATTGTGCTGTTGGATTGCTGTTTGCTTTTCTTCCAGTTCTTGGGGGGACCTCTGGTGTTCTTCAAGGATTGATGTCCATGGCTAAATTGTTGGTGACATTGATAACATTTTTGGCTGTTTTGTCAATATTGTCCCGTACATGTGTGCCATGGTTCCTTAAGCTGATGATAAGTCTATCATCACAGACCAATGAACTCTATCAGTTGGCATCAGTTGCATTTTGCTTGCTTGTAGCCTGGAGTAGTGATAAGCTGGGACTAAGTCTAGAACTTGGCTCTTTTGCTGCTGGAGTGATGATATCAACAACTGATCTTGCTCAGCATACGCTAGAACAAATTGAACCTATTCGGAACTTTTTTGCTGCTCTTTTCCTTGCCAGTATTGGAATGCTGATTCATGTTCAATTTCTTTGGAACCATGTCGATATATTGCTAGCATCTGTGATTCTGGTGATTATTGTAAAAACAATTATCATCAGCACAGTGGTGAAGGGATTTGGTTACAACAACAAGACCGCACTTCTTGTTGGTATGTCACTGGCTCAAATAGGGGAATTTGCTTTTGTTCTTCTCAGCCGAGCTTCTAATCTTCATCTAGTTGAGGGGAAAGTGTATCTTCTACTTATTGGGACCACTGCTCTCAGTCTGGTGACAACTCCTCTGCTTTTCAAGCTGATTCCGTCCGTAGTTCATATGGGTGTGCTGTTAAAGTGGTTCGCCCCAGACAGCTCTATCGAGATCGTCGGATTTAAAGCAGATATCCTCCGTTCGGACAGCGTCAAGCAGCGTGTTATATTAATAAATCAAGGGCCCCACGATTCATGA 1758 42.66 MLRMLASSDLRFFLVCFGVLVSSLSFAVPPLAESDRSLLVNVTTESNNASVSRNKEGSFADIIDRALENEFKESDQNEVPDAGSFNNSVAEQQAVLETVARVKTKKNDTKEEKSFQLQNVFNLDSDNRAEETPTLIDRKDNVFIISNFKSKYPVLQLDIRLISDLVIVIVSATCGGIAFACAGQPVITGYLLSGSIVGPGGFNFVGEMVQVETVAQFGVIFLLFALGLEFSITKLRVVRAVAILGGLLQIFLFMCLSGITASLCGGKASEGVFVGTFLSMSSTAVVLKFLMEKNSTNVLHGQVTIGTLILQDCAVGLLFAFLPVLGGTSGVLQGLMSMAKLLVTLITFLAVLSILSRTCVPWFLKLMISLSSQTNELYQLASVAFCLLVAWSSDKLGLSLELGSFAAGVMISTTDLAQHTLEQIEPIRNFFAALFLASIGMLIHVQFLWNHVDILLASVILVIIVKTIIISTVVKGFGYNNKTALLVGMSLAQIGEFAFVLLSRASNLHLVEGKVYLLLIGTTALSLVTTPLLFKLIPSVVHMGVLLKWFAPDSSIEIVGFKADILRSDSVKQRVILINQGPHDS 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12461154 12467121 - Conep04aG0170900.1 Cone4ag1656 436634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1656 585 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 43 568 IPR045158 GO:0015386(InterPro)|GO:0071805(InterPro)|GO:1902600(InterPro)
Cone4ag1656 585 Gene3D - 158 543 IPR038770 -
Cone4ag1656 585 Pfam Sodium/hydrogen exchanger family 169 535 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1656 Cone-Chr4:12461154 Cone8ag1043 Cone-Chr8:9593958 4.97E-28 dispersed
Cone4ag1656 Cone-Chr4:12461154 Cone7ag0735 Cone-Chr7:4467331 4.69E-299 wgd
Cone4ag1656 Cone-Chr4:12461154 Cone7ag1295 Cone-Chr7:9535397 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1656 K26735 - csv:101217282 940.258