Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1663 ATGATGTGGCGGCATCTCTGGCCGATTCTCTTATTCGATGATCTTACAGAAAAAACTCGTCTTTTCTCAGGATCCTTTTTACAGACAATCTCAGAATCGATGACCACCACATGTGGAGATTCCGACTCGGAACTCTGCCGAGATGACTCAGAAGCATTCGTTCTCAAACTGATCGCAATCGCATCGATCCTTACCGCCGGAGCCGTCGGAATTCTCATCTCACTGATCGGGAAAAACGGACGGTTTCTTAAAACAGATGGCAACCTCTTCGTGGGCGCCAAGGCCTTCGCTGCCGGCGTGATCCTCGCCACTGGATTCGTTCACATGCTACCGGACGGATCGAAAGCTCTATCCAGTTCATGCTTACCGGAATATCCGTGGTCCAAGTTCCCATTTGCTGGGTTCTTCGCCATGATGGCTTCGCTCTTGACCCTCCTTGTTGACTTTGTGGGGACCCATTATTACGAGCGGAAACAGGGCCTGATCCGTTCGGGCGATGATTATAAGCGGGCCGGAGCGGTTGATGGAGATCTAGAATCGGGTATTGAGGACGACGTCCTTGAGAATAAGGAGCGAAGTGGGAAAGCGTTTGGGGAAGAAGGCGGTGGAATGCACATCGTTGGAATGCATGCACACGTGGCGCACCATAGGCACAACCATCCACATGGGAATGAGGCATGTGAGGGGCACGCGAGTGAACAATATATTGATCATGGTCATGGGCATGGACATTCACATGGGCATTCGCATGGCCTTGGAGACGCTGACGAGGACGATGATGCTCGGCACGTTGTCGTTTCTCAGATATTAGAACTTGGGATCATTTCACATTCAGTGCTAATTGGGCTATCGCTTGGAGTTTCACAAAGCCCGTGTACAATTAGACCCTTAATAGCAGCATTATCTTTTCATCAATTCTTTGAAGGATTTGCACTAGGCGGGTGCATCTCTCTGGCCCACTTCAGTGGCCTATCAGCCACTCTAATGTCATGTTTCTTCGTCATAACAACACCAGTCGGGATCGGAATCGGAATAGGGATTTCGTCGTTCTACAATCCCAACAGCGTAGGGGCATTGGTTGCTGAAGGGATATTGGATTCTCTGTCGTCTGGAATTCTGATCTATATGGCTTTAGTGGATCTGGTTGCAGCTGACTTTTTGAGTAAGAGAATGAGATGTAATTTTAGGCTTCAAGTAGTTTCTTATCTTTTGCTCTTCCTCGGTGCTGGTTGCATGTCTTCTCTTGCTCTTTGGGCTTGA 1260 48.89 MMWRHLWPILLFDDLTEKTRLFSGSFLQTISESMTTTCGDSDSELCRDDSEAFVLKLIAIASILTAGAVGILISLIGKNGRFLKTDGNLFVGAKAFAAGVILATGFVHMLPDGSKALSSSCLPEYPWSKFPFAGFFAMMASLLTLLVDFVGTHYYERKQGLIRSGDDYKRAGAVDGDLESGIEDDVLENKERSGKAFGEEGGGMHIVGMHAHVAHHRHNHPHGNEACEGHASEQYIDHGHGHGHSHGHSHGLGDADEDDDARHVVVSQILELGIISHSVLIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISLAHFSGLSATLMSCFFVITTPVGIGIGIGISSFYNPNSVGALVAEGILDSLSSGILIYMALVDLVAADFLSKRMRCNFRLQVVSYLLLFLGAGCMSSLALWA 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12488667 12494475 - Conep04aG0171600.1 Cone4ag1663 436641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1663 419 NCBIfam ZIP zinc/iron transport family 38 419 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Cone4ag1663 419 Pfam ZIP Zinc transporter 55 416 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Cone4ag1663 419 MobiDBLite consensus disorder prediction 235 257 - -
Cone4ag1663 419 PANTHER ZINC/IRON TRANSPORTER 52 418 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1663 Cone-Chr4:12488667 Cone9ag0269 Cone-Chr9:1146817 1.05E-84 dispersed
Cone17ag0926 Cone-Chr17:7271060 Cone4ag1663 Cone-Chr4:12488667 6.11E-169 wgd
Cone20ag0270 Cone-Chr20:1203835 Cone4ag1663 Cone-Chr4:12488667 7.31E-188 wgd
Cone4ag1663 Cone-Chr4:12488667 Cone7ag1290 Cone-Chr7:9516202 6.93E-236 wgd
Cone4ag1663 Cone-Chr4:12488667 Cone7ag0057 Cone-Chr7:249044 1.65E-53 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1663 K14709 - cit:102625806 544.273