Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone4ag1668 | ATGGAATTGGAACTCTACTCTCTGATTGCAACACTATTCACAGCGTTGGGATTGCTGGCTGGCCTTTTGGGCTACTTTTATGGGCCCTACTGGGGCGTTAGAAAGGTGCCTGGTCCTCCGGCTATTCCTCTTGTAGGACACCTCCCCTACCTCGCTAAATACGGTCCTGAAGTTTTCTCCGTCTTTGCCAAACGCTATGGCCCCATTTTCAGGCAGCCATTGATAATCATAGCAGATGCAGAGCTATGTAGAGAAGTTGGAATCAAGAAATTCAAAGAAATTCCGAATAGAAGCATTCCTTCTCCGATCTCTGCCTCCCCTCTTCATCAAAAGGGACTTTTCTTCACTAGAGATGCAAGATGGTCCACAATGAGGAACACCATACTATCAGTATATCAACCTTCACATCTAGCCAGCTTAATCCCCACAATGCAATCCTTCATTGAATCAGGAACCCAAAACCTCCGTCAAAAACAAGAAGAAGACATCCCTTTCTCTAACCTCTCGCTCAAACTAGCCACGGACATTATCGGACAAGCTGCTTTCGGAGTTGACTTCGGCCTCTCCAAACCCGCCGGTCACACCGACATCAAAAAAGACAACAGCAACATCAAAAACAGCCACGTTTCAGACTTCCTTGACCAACACATCTATTCCACAACACAGCTTAAGATGGACTTATCTGGTTCCTTCTCGATCATACTCGGATTGCTCGTCCCGGTCCTTCAAGAACCGTTCAGACAGATTCTCAAGAGAATTCCGGGAACTATGGACTGGAAAGTTGACCGGACAAACAAAAATCTAAGCGGCCGGCTTACAGAAATTGTCGAAAAGAGAATGCAAGAAAAAATCAGTGATTCGAAAGACTTCTTGTCACTTATATTAAGTGCAAGAGAATCTAAGGCAGTGTCTGAAAATGTTTTCACGCCGGACTATATTATTGCAGTTACTTATGAGCATTTACTTGCCGGCTCAGCTACTACGTCATTTACTTTATCTTCTATTGTTTATTTAGTTGCTGCCCAACCGGAAGTCGAGAGAAAACTGCTAGCTGAGATAGACGGATACGGTCCGCTGGATCAGATACCTACAGCTGATGATCTTCAGAACAAGTTTCCATATCTTGATCAGGTGATAAAAGAGTCTATGAGATTCCACACTGTCTCTCCTCTTATAGCTAGAGAAGCATCTAAAGAAGTAGAGATTGGTGGCTATATTCTCCCCAAGGGGACATGGATTTGGCTATCGCCAGGTGTTTTAGCGAAGGATGCGAGAAACTTCCCGGAACCTGAGAAGTTCAAACCAGAGAGGTTTGATCCAAAATGCGAAGAAGAGAAACAGAGGCACCCATATGCTTTTATACCATTTGGAATTGGTCCTAGAGCATGCATTGGGCAGAAGTTTTCTCTACAAGAGATAAAGCTTTCTCTGATTCATTTATACAGGAGATTTGTTTTTCAACATTCGCCTGATATGGAAAACCCGCCTGAGCTCGAGTATGGAGTTGTTCTTAGCTTCAAGAATGGTGTCAAGCTCAGAGTCCAAACACGTACATGA | 1557 | 44.06 | MELELYSLIATLFTALGLLAGLLGYFYGPYWGVRKVPGPPAIPLVGHLPYLAKYGPEVFSVFAKRYGPIFRQPLIIIADAELCREVGIKKFKEIPNRSIPSPISASPLHQKGLFFTRDARWSTMRNTILSVYQPSHLASLIPTMQSFIESGTQNLRQKQEEDIPFSNLSLKLATDIIGQAAFGVDFGLSKPAGHTDIKKDNSNIKNSHVSDFLDQHIYSTTQLKMDLSGSFSIILGLLVPVLQEPFRQILKRIPGTMDWKVDRTNKNLSGRLTEIVEKRMQEKISDSKDFLSLILSARESKAVSENVFTPDYIIAVTYEHLLAGSATTSFTLSSIVYLVAAQPEVERKLLAEIDGYGPLDQIPTADDLQNKFPYLDQVIKESMRFHTVSPLIAREASKEVEIGGYILPKGTWIWLSPGVLAKDARNFPEPEKFKPERFDPKCEEEKQRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIHLYRRFVFQHSPDMENPPELEYGVVLSFKNGVKLRVQTRT | 518 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 12507249 | 12509259 | + | Conep04aG0172100.1 | Cone4ag1668 | 436646 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone4ag1668 | 518 | PRINTS | P450 superfamily signature | 323 | 340 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1668 | 518 | PRINTS | P450 superfamily signature | 454 | 463 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1668 | 518 | PRINTS | P450 superfamily signature | 463 | 474 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1668 | 518 | PRINTS | P450 superfamily signature | 377 | 388 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1668 | 518 | SUPERFAMILY | Cytochrome P450 | 29 | 517 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1668 | 518 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 456 | 465 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone4ag1668 | 518 | Gene3D | Cytochrome P450 | 27 | 518 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1668 | 518 | Pfam | Cytochrome P450 | 37 | 504 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1668 | 518 | PRINTS | E-class P450 group I signature | 332 | 358 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1668 | 518 | PRINTS | E-class P450 group I signature | 376 | 394 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1668 | 518 | PRINTS | E-class P450 group I signature | 416 | 440 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1668 | 518 | PRINTS | E-class P450 group I signature | 63 | 82 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1668 | 518 | PRINTS | E-class P450 group I signature | 463 | 486 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1668 | 518 | PRINTS | E-class P450 group I signature | 453 | 463 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1668 | 518 | PRINTS | E-class P450 group I signature | 312 | 329 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1668 | 518 | PANTHER | THROMBOXANE-A SYNTHASE | 8 | 517 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone12ag0180 | Cone-Chr12:896310 | Cone4ag1668 | Cone-Chr4:12507249 | 6.73e-313 | dispersed | |
| Cone4ag1668 | Cone-Chr4:12507249 | Cone6ag0705 | Cone-Chr6:3567393 | 1.85E-23 | dispersed | |
| Cone4ag1668 | Cone-Chr4:12507249 | Cone5ag0921 | Cone-Chr5:3943056 | 3.52E-24 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone4ag1668 | K20771 | - | rcu:8274543 | 803.127 |