Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1668 ATGGAATTGGAACTCTACTCTCTGATTGCAACACTATTCACAGCGTTGGGATTGCTGGCTGGCCTTTTGGGCTACTTTTATGGGCCCTACTGGGGCGTTAGAAAGGTGCCTGGTCCTCCGGCTATTCCTCTTGTAGGACACCTCCCCTACCTCGCTAAATACGGTCCTGAAGTTTTCTCCGTCTTTGCCAAACGCTATGGCCCCATTTTCAGGCAGCCATTGATAATCATAGCAGATGCAGAGCTATGTAGAGAAGTTGGAATCAAGAAATTCAAAGAAATTCCGAATAGAAGCATTCCTTCTCCGATCTCTGCCTCCCCTCTTCATCAAAAGGGACTTTTCTTCACTAGAGATGCAAGATGGTCCACAATGAGGAACACCATACTATCAGTATATCAACCTTCACATCTAGCCAGCTTAATCCCCACAATGCAATCCTTCATTGAATCAGGAACCCAAAACCTCCGTCAAAAACAAGAAGAAGACATCCCTTTCTCTAACCTCTCGCTCAAACTAGCCACGGACATTATCGGACAAGCTGCTTTCGGAGTTGACTTCGGCCTCTCCAAACCCGCCGGTCACACCGACATCAAAAAAGACAACAGCAACATCAAAAACAGCCACGTTTCAGACTTCCTTGACCAACACATCTATTCCACAACACAGCTTAAGATGGACTTATCTGGTTCCTTCTCGATCATACTCGGATTGCTCGTCCCGGTCCTTCAAGAACCGTTCAGACAGATTCTCAAGAGAATTCCGGGAACTATGGACTGGAAAGTTGACCGGACAAACAAAAATCTAAGCGGCCGGCTTACAGAAATTGTCGAAAAGAGAATGCAAGAAAAAATCAGTGATTCGAAAGACTTCTTGTCACTTATATTAAGTGCAAGAGAATCTAAGGCAGTGTCTGAAAATGTTTTCACGCCGGACTATATTATTGCAGTTACTTATGAGCATTTACTTGCCGGCTCAGCTACTACGTCATTTACTTTATCTTCTATTGTTTATTTAGTTGCTGCCCAACCGGAAGTCGAGAGAAAACTGCTAGCTGAGATAGACGGATACGGTCCGCTGGATCAGATACCTACAGCTGATGATCTTCAGAACAAGTTTCCATATCTTGATCAGGTGATAAAAGAGTCTATGAGATTCCACACTGTCTCTCCTCTTATAGCTAGAGAAGCATCTAAAGAAGTAGAGATTGGTGGCTATATTCTCCCCAAGGGGACATGGATTTGGCTATCGCCAGGTGTTTTAGCGAAGGATGCGAGAAACTTCCCGGAACCTGAGAAGTTCAAACCAGAGAGGTTTGATCCAAAATGCGAAGAAGAGAAACAGAGGCACCCATATGCTTTTATACCATTTGGAATTGGTCCTAGAGCATGCATTGGGCAGAAGTTTTCTCTACAAGAGATAAAGCTTTCTCTGATTCATTTATACAGGAGATTTGTTTTTCAACATTCGCCTGATATGGAAAACCCGCCTGAGCTCGAGTATGGAGTTGTTCTTAGCTTCAAGAATGGTGTCAAGCTCAGAGTCCAAACACGTACATGA 1557 44.06 MELELYSLIATLFTALGLLAGLLGYFYGPYWGVRKVPGPPAIPLVGHLPYLAKYGPEVFSVFAKRYGPIFRQPLIIIADAELCREVGIKKFKEIPNRSIPSPISASPLHQKGLFFTRDARWSTMRNTILSVYQPSHLASLIPTMQSFIESGTQNLRQKQEEDIPFSNLSLKLATDIIGQAAFGVDFGLSKPAGHTDIKKDNSNIKNSHVSDFLDQHIYSTTQLKMDLSGSFSIILGLLVPVLQEPFRQILKRIPGTMDWKVDRTNKNLSGRLTEIVEKRMQEKISDSKDFLSLILSARESKAVSENVFTPDYIIAVTYEHLLAGSATTSFTLSSIVYLVAAQPEVERKLLAEIDGYGPLDQIPTADDLQNKFPYLDQVIKESMRFHTVSPLIAREASKEVEIGGYILPKGTWIWLSPGVLAKDARNFPEPEKFKPERFDPKCEEEKQRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIHLYRRFVFQHSPDMENPPELEYGVVLSFKNGVKLRVQTRT 518
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 12507249 12509259 + Conep04aG0172100.1 Cone4ag1668 436646
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1668 518 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1668 518 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1668 518 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1668 518 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1668 518 SUPERFAMILY Cytochrome P450 29 517 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1668 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone4ag1668 518 Gene3D Cytochrome P450 27 518 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1668 518 Pfam Cytochrome P450 37 504 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1668 518 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1668 518 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1668 518 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1668 518 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1668 518 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1668 518 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1668 518 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone4ag1668 518 PANTHER THROMBOXANE-A SYNTHASE 8 517 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0180 Cone-Chr12:896310 Cone4ag1668 Cone-Chr4:12507249 6.73e-313 dispersed
Cone4ag1668 Cone-Chr4:12507249 Cone6ag0705 Cone-Chr6:3567393 1.85E-23 dispersed
Cone4ag1668 Cone-Chr4:12507249 Cone5ag0921 Cone-Chr5:3943056 3.52E-24 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1668 K20771 - rcu:8274543 803.127