Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1669 ATGAAATGGAAAATATGGAGGAGCCCATCTGGGGATCTAAGCTCTGCTTGGAAGAGGGGATTCAAAGGGGGCCGTAAAGCTGCTTCTGAAGGCTCCGATTCTCCACGTGCAGGTACACCTGATAATGCTTTTACAGCTGCTATGGCTACACTTGTTCGAGCTCCACCTAAAGATTTCAGGGTCGTTAGACAAGAGTGGGCTGCGATCCGGATCCAAACTGCTTTTCGCGCCTTCTTGGCAAGAAGAGCTAGGCGGGCCTTGAAAGGGATAGTAAGGCTTCAAGCACTAGTTCGGGGCCGACAGGTGAGGAAGCAGGCTGCCGTGACACTGCGGTGCATGCAGGCGCTTGTTCGGGTCCAGGCCCGAGTTAGAGCCCGTCATGTCAGAATGTCCATGGAGGGCCAAGCTGTCCAGCAAATGCTCGATACTCGCCGCTCCGAGGCAGATCTCCTAAAACAAGCTGAGGAAGGGTGGTGTGATAGAAAAGGAACACTAGAAGATGTCAAAGCAAAGATTCAAATGAGACAACAAGGAGCCTTTAAACGAGAGAGAGCAATAGCATATGCCATTTATCAGAAGCAAACTACTACCCCATGTTCAATATCTCAATCGAATGCCTCAATTCCCTCCCTGAAGAGCAATAACAACCTTGACAAGACCAGCTCGGGATGGAGCTGGTTAGAACGATGGATGGCAGCTAAACCATGGGAAGCCCGGTTAATGGAACAGCAATCATCATATAACCCTGACCAGTTTGACACAACTTCTACTCCACCGCCTTCAAAGAGTTGTAATAATAAAATGAAGAATTCGGAACCGTCCTATGTTAAAGTAAGAAAGAACAATGTTAGTACAAGAATTTCGGCTAAGCCACCTCATTTCGGTCAAGCTATCAGATCATCTTCAAGTCCGAGTTCTGATTTCCGGTATCATGATGAGAGCTCTGCTTCTTCTTTTTGCACGTCCACAACTCCTGGATCAGGTAATAATACTGTAATGGGTTTGGATAAATCAGAGGATAGTGGAAACTGTCGTCCGAGTTATATGAATTTGACCGAGTCAACTAAGGCAAAGCAAAGAGGAAATGGTTATTCAAACACTAGAACTCAAAGGCAGTGCATGGATGAGTTCCAGTTTCTTAAGAAGTCTGGAGCTTTCTCAAATGGGGACTCGAAAAGCAGTGCCGGTTCCAATCCTTCCATCAATTTTTCTGAACCTTTGATCCAGCCAACTGGACTCGAAAAGAAGACAATTACAATGAGGTGA 1266 46.45 MKWKIWRSPSGDLSSAWKRGFKGGRKAASEGSDSPRAGTPDNAFTAAMATLVRAPPKDFRVVRQEWAAIRIQTAFRAFLARRARRALKGIVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARHVRMSMEGQAVQQMLDTRRSEADLLKQAEEGWCDRKGTLEDVKAKIQMRQQGAFKRERAIAYAIYQKQTTTPCSISQSNASIPSLKSNNNLDKTSSGWSWLERWMAAKPWEARLMEQQSSYNPDQFDTTSTPPPSKSCNNKMKNSEPSYVKVRKNNVSTRISAKPPHFGQAIRSSSSPSSDFRYHDESSASSFCTSTTPGSGNNTVMGLDKSEDSGNCRPSYMNLTESTKAKQRGNGYSNTRTQRQCMDEFQFLKKSGAFSNGDSKSSAGSNPSINFSEPLIQPTGLEKKTITMR 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12509334 12510946 - Conep04aG0172200.1 Cone4ag1669 436647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1669 421 Pfam IQ calmodulin-binding motif 66 82 IPR000048 GO:0005515(InterPro)
Cone4ag1669 421 ProSiteProfiles IQ motif profile. 88 115 - -
Cone4ag1669 421 PANTHER IQ-DOMAIN 5-RELATED 39 365 - -
Cone4ag1669 421 MobiDBLite consensus disorder prediction 387 407 - -
Cone4ag1669 421 MobiDBLite consensus disorder prediction 287 367 - -
Cone4ag1669 421 MobiDBLite consensus disorder prediction 387 421 - -
Cone4ag1669 421 ProSiteProfiles IQ motif profile. 64 92 - -
Cone4ag1669 421 MobiDBLite consensus disorder prediction 246 274 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1669 Cone-Chr4:12509334 Cone5ag1312 Cone-Chr5:7581605 1.67E-36 dispersed
Cone17ag0933 Cone-Chr17:7298473 Cone4ag1669 Cone-Chr4:12509334 5.65E-106 wgd
Cone20ag0275 Cone-Chr20:1221713 Cone4ag1669 Cone-Chr4:12509334 8.81E-108 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1669 - - - 0.0