Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag1678 | ATGGAGGATCAACAAGGGGGGGAGAGTAAGGGAGAAGAGGAAGTGCTTGGATCGAGCTTAACGATGGAGAAGGTGGCTGCGGCGAAGAAGCTTATAGAGAACCACTACAGAGCTCAGATGAAGAACATTCAAGAGCGGAAAGAGAGACGATGGGTGTTAGAGAGAAGACTTGCATCGTCTGATGTGCCTAAAGAGGAGCAGATCAACCTTATTAAAGATCTAGAGAGGAAAGAGACAGAGTTTATGCGGCTGAAAAGGCACAAGATATGCGTAGATGATTTTGAGCTATTAACCATCATTGGAAGGGGGGCATTTGGTGAGGTTCGATTGTGTCGGGAGAAGAAATCTGGCAATATATATGCCATGAAGAAATTGAAGAAGTCCGAAATGGTTAAGAGAGGACAGGTGGAACATGTCAGAGCGGAGAGAAACTTGCTAGCAGAAGTTGCCAGTCATTGCATAGTGAAACTTTACTACTCATTTCAGGACACAGAGTATTTGTATTTGATCATGGAATACCTTCCAGGTGGTGATGTGATGACTCTGCTGATGAGAGAAGACACATTAACTGAAAACGTGGCTAAATTTTACATTGCTCAAAGTGTCCTCGCAATAGAATCTATTCACAAGCACAACTACATTCACAGAGATATTAAACCAGACAACCTTCTTCTGGACAAAAATGGTCACATGAAGCTCTCGGACTTTGGCCTATGTAAACCCCTTGATTGTTCAACCCTATCTACGCTGCATGAAAACAAAACCATAGATGACGAAAATTCGGCAGAACCAATGGAAATCGACAGTGTTCCGGATGCTTCCAATCAGCCTATTTGGAAAAGCCCTCTTGAGCAGCTTCAGCATTGGCAGAGGAACCGAAGGAAGTTGGCATTTTCAACTGTAGGGACGCCAGATTATATCGCCCCTGAAGTATTACTGAAAAAGGGATATGGGATGGAATGTGACTGGTGGTCTCTTGGTGCTATAATGTATGAAATGCTTGTAGGTTACCCTCCGTTTTATTCAGATGACCCAATCACCACCTGCAGAAAGATTGTTCATTGGAAAAATCACTTAACATACCCAGAAGACGCAAAGCTGTCCCCGAAGGCTAAGGATCTTATCTGTAGGTTGCTATGTGATGTTGACAATAGGCTAGGTAGCGGAGGAGTGTACCAAATAAAAGCTCATCCTTGGTTCAATGACGTTGTATGGGATAAACTTTATGAAATGGAGGCAGCATTCAAGCCGGAAGTAAACGGAGAACTTGACACCCAGAATTTTATGAAGTTTGACGAATTGGATCCTCCTACACCAGCAAGAACTGGCTCTGGACCGTCAAGGAAGATGCTATTGACTCCCAAAGATCTTAGCTTTGTTGGATATACATACAAGAACTTCGATGCTGTCAAAGGGCGTCACCTGTTTGATCCTGATAGAAGTATGTCATCAGGACAGCCACCAACAAAGACTATCTACAATGACTCTAGGGCAGATTATAGTAGTGATCTAATAGCCGATGAATCCGAGGTGCAGATGCTAGCATTGTCAGGCATTAGGTCGAAAGATTTGTAA | 1575 | 43.37 | MEDQQGGESKGEEEVLGSSLTMEKVAAAKKLIENHYRAQMKNIQERKERRWVLERRLASSDVPKEEQINLIKDLERKETEFMRLKRHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDVMTLLMREDTLTENVAKFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLSTLHENKTIDDENSAEPMEIDSVPDASNQPIWKSPLEQLQHWQRNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPITTCRKIVHWKNHLTYPEDAKLSPKAKDLICRLLCDVDNRLGSGGVYQIKAHPWFNDVVWDKLYEMEAAFKPEVNGELDTQNFMKFDELDPPTPARTGSGPSRKMLLTPKDLSFVGYTYKNFDAVKGRHLFDPDRSMSSGQPPTKTIYNDSRADYSSDLIADESEVQMLALSGIRSKDL | 524 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 12544530 | 12548566 | + | Conep04aG0173200.1 | Cone4ag1678 | 436656 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag1678 | 524 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 401 | 474 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag1678 | 524 | FunFam | Non-specific serine/threonine protein kinase | 299 | 418 | - | - | |
Cone4ag1678 | 524 | ProSiteProfiles | Protein kinase domain profile. | 94 | 400 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag1678 | 524 | FunFam | Non-specific serine/threonine protein kinase | 55 | 177 | - | - | |
Cone4ag1678 | 524 | Pfam | Protein kinase C terminal domain | 419 | 464 | IPR017892 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag1678 | 524 | FunFam | Non-specific serine/threonine protein kinase | 419 | 429 | - | - | |
Cone4ag1678 | 524 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 213 | 225 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone4ag1678 | 524 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 27 | 468 | IPR050236 | GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER) | |
Cone4ag1678 | 524 | CDD | MobB_NDR_LATS-like | 28 | 89 | - | - | |
Cone4ag1678 | 524 | CDD | STKc_NDR_like | 92 | 465 | - | - | |
Cone4ag1678 | 524 | FunFam | Non-specific serine/threonine protein kinase | 178 | 245 | - | - | |
Cone4ag1678 | 524 | Gene3D | Transferase(Phosphotransferase) domain 1 | 178 | 245 | - | - | |
Cone4ag1678 | 524 | Gene3D | Transferase(Phosphotransferase) domain 1 | 299 | 418 | - | - | |
Cone4ag1678 | 524 | SMART | serkin_6 | 94 | 400 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag1678 | 524 | ProSitePatterns | Protein kinases ATP-binding region signature. | 100 | 123 | IPR017441 | GO:0005524(InterPro) | |
Cone4ag1678 | 524 | Pfam | Protein kinase domain | 297 | 400 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag1678 | 524 | Pfam | Protein kinase domain | 95 | 245 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag1678 | 524 | MobiDBLite | consensus disorder prediction | 476 | 495 | - | - | |
Cone4ag1678 | 524 | SUPERFAMILY | Protein kinase-like (PK-like) | 78 | 447 | IPR011009 | - | |
Cone4ag1678 | 524 | SMART | pkinase_C_6 | 401 | 466 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone4ag1678 | 524 | Gene3D | Phosphorylase Kinase; domain 1 | 419 | 429 | - | - | |
Cone4ag1678 | 524 | Gene3D | Phosphorylase Kinase; domain 1 | 92 | 177 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone15ag0165 | Cone-Chr15:793624 | Cone4ag1678 | Cone-Chr4:12544530 | 1.39E-227 | dispersed | |
Cone4ag1678 | Cone-Chr4:12544530 | Cone5ag1534 | Cone-Chr5:10521986 | 2.46E-219 | dispersed | |
Cone4ag1678 | Cone-Chr4:12544530 | Cone7ag0749 | Cone-Chr7:4583179 | 4.46E-261 | wgd | |
Cone4ag1678 | Cone-Chr4:12544530 | Cone7ag1274 | Cone-Chr7:9450042 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82800 | PF08282 | Hydrolase_3 | 6.00E-27 | CL0137 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag1678 | K08790 | - | cit:102627835 | 906.746 |