Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1686 ATGAACTTAGATACTGCCGAGGATGATTCGGCCAGAGAAATTCACATCCCAGCAGAAATAGACTGGCATATGCTTGATAAGTCCAAATTCTTTTTCCTAGGAGCCGGCTTATTTTCCAGTGTATCAACTGCTCTTTATCCAATTATCGTATTGAAAACCCAGCAACAGGTTTCACCCACCAAAATTACTTGCCTCAAACTATCCCACAACATTTTTTGCCATGAAGGGTTTAGAGGATTCTACAGAGGTTATGGTACATCCTTAATGGGAACAATCCCGGCTCGAGCCCTTTACATGGGAGCTCTTGAAATCACGAAAAGCAATGTCGGAAGTGTAACTATGGGGCTAGGGTTTTCAGAAACCGCAGCCATGACTTTAGCTAATGGAGCAGCTGGGGTGAGTTCAGCCATGGCTGCTCAATTGGTTTGGACCCCGATAGATATAGTGAGCCAGAGACTAATGGTTCAAGGTTGCAACTATAGTTCAAAAGACACGGTTCCAAATCTCAATAACCCCTTGAGATATAGTAATGGGATCGATGCATTTCGGAAAATTATATATTCAGATGGATTGAGAGGATTGTATCGAGGATTTGGGATCTCTATATTGACTTACGCCCCATCTAATGCTGTTTGGTGGACTTCTTATTCTTTAGTTCATAGGCTTATATGGACTAGTCTTGGTTGCAATACAAGTAAAAAAGATGATGAAAGTAGTGTTAATTGTGGTTGTGGTGGTTATAGGCCGGATCAGAAGGCGGTGGTGGCGATTCAGGGGTTGAGTGCCTCAATGGCAAGTGGGGTTTCTGCGGTTATAACGATGCCATTGGATACTATAAAGACTAGGTTGCAAGTTTTGGATGGGGAGGAAAATGGACAGAGAAAGCCTTTGACAGTTTTGCAGACTGTTAAGAATTTGGTGAAGGAGGGGGGATTAAGAGCTTGTTACAGAGGGTTGGGCCCAAGATGGGTATCGACTGCTATGTCTGCTACTACTATGATCACTACCTACGAGTTTCTTAAACGGCTATCAGCTAAGAATCAAGACCCGAGAGATGGAGAAATGAGCAGGTGA 1074 43.3 MNLDTAEDDSAREIHIPAEIDWHMLDKSKFFFLGAGLFSSVSTALYPIIVLKTQQQVSPTKITCLKLSHNIFCHEGFRGFYRGYGTSLMGTIPARALYMGALEITKSNVGSVTMGLGFSETAAMTLANGAAGVSSAMAAQLVWTPIDIVSQRLMVQGCNYSSKDTVPNLNNPLRYSNGIDAFRKIIYSDGLRGLYRGFGISILTYAPSNAVWWTSYSLVHRLIWTSLGCNTSKKDDESSVNCGCGGYRPDQKAVVAIQGLSASMASGVSAVITMPLDTIKTRLQVLDGEENGQRKPLTVLQTVKNLVKEGGLRACYRGLGPRWVSTAMSATTMITTYEFLKRLSAKNQDPRDGEMSR 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12570440 12572184 + Conep04aG0174000.1 Cone4ag1686 436664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1686 357 ProSiteProfiles Solute carrier (Solcar) repeat profile. 30 108 IPR018108 -
Cone4ag1686 357 PRINTS Mitochondrial carrier protein signature 195 213 IPR002067 GO:0055085(InterPro)
Cone4ag1686 357 PRINTS Mitochondrial carrier protein signature 43 57 IPR002067 GO:0055085(InterPro)
Cone4ag1686 357 PRINTS Mitochondrial carrier protein signature 138 156 IPR002067 GO:0055085(InterPro)
Cone4ag1686 357 PRINTS Mitochondrial carrier protein signature 262 284 IPR002067 GO:0055085(InterPro)
Cone4ag1686 357 Pfam Mitochondrial carrier protein 126 224 IPR018108 -
Cone4ag1686 357 Pfam Mitochondrial carrier protein 41 108 IPR018108 -
Cone4ag1686 357 Pfam Mitochondrial carrier protein 257 346 IPR018108 -
Cone4ag1686 357 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 222 IPR018108 -
Cone4ag1686 357 SUPERFAMILY Mitochondrial carrier 24 340 IPR023395 -
Cone4ag1686 357 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 8 349 - -
Cone4ag1686 357 ProSiteProfiles Solute carrier (Solcar) repeat profile. 253 343 IPR018108 -
Cone4ag1686 357 Gene3D Mitochondrial carrier domain 30 355 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1686 Cone-Chr4:12570440 Cone7ag1234 Cone-Chr7:9152009 2.39E-159 dispersed
Cone4ag1686 Cone-Chr4:12570440 Cone7ag1604 Cone-Chr7:10937352 3.85E-237 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1686 K15121 - csv:101213436 542.347