Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1705 ATGGTGGCGCCGGGGCTAGTCGCCGGTAGTCTGACGGCTCATAATCGGCAGGTACTCACTGCCGTGAACGCCGGAGCGTCGAGTCTCTCATTCGTAGGGGCGGGGTTCATTGTGCTCTGCTATGTCCTCTTCAAAGAGCTTCGCAAGTTCTCATTCAAGCTTGTTTTTTATCTCGCCATCGCTGACATGCTTTGCAGTTTCTTCAGCATTATTGGTGAGCCCGCAAAAGGATTCTATTGTTATGGTCAGGGCTATACTACACATTTCTTCTGTGTGGCATCTTTCCTATGGACCACGACAATTGCTTTTACCCTTCACCGCACTGTCGTCAAACACAAAACAGATGTTGAAGATATGGAAGCTATGTTTCACTTGTATGTTTGGGGAACATCATTAGTAATGACCGTCATACGCTCACTTGGAAATGACCATGGACGTTTAAGCGCATGGTGTTGGACCCAATCTGGACGCACAGGAAAGGCTGTTCACTTTATAACATTTTATCTGCCACTCTGGGGAGCGATTCTGTACAATGGTTTTACATATCTTCAAGTGATACGCATGATAAACAATGCAACTCGTATGGCAGTTGGCATTTCGGATAGGGCTTTCCAATTAGATGCAAGAGCAGATATGAAGGCTTTGAACCGTTGGGGTTATTATCCTCTTATTCTCATAGGATCGTGGGCATTTGGCACAATCAATCGCATTCATGATTTTATCGAGCCTGGTCACAAACTCTTTTGGCTCTCGGTTCTTGATGTTGGAACGGCTGCACTTATGGGCTTATTCAATTCAATAGCATATGGCCTGAATGCTTCAGTAAGGCGTGCAATTCAAGAAAGACTCGACCTGTTCTGGCCGGAAAGGCTTAGGAGATGGTTCCCTAACAGTTCAAGATTTAAGAACCAACATCAAGAGAGTGAACTAGTTTCATTGAAAATTGATGATCAACATTAG 960 44.79 MVAPGLVAGSLTAHNRQVLTAVNAGASSLSFVGAGFIVLCYVLFKELRKFSFKLVFYLAIADMLCSFFSIIGEPAKGFYCYGQGYTTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDMEAMFHLYVWGTSLVMTVIRSLGNDHGRLSAWCWTQSGRTGKAVHFITFYLPLWGAILYNGFTYLQVIRMINNATRMAVGISDRAFQLDARADMKALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKLFWLSVLDVGTAALMGLFNSIAYGLNASVRRAIQERLDLFWPERLRRWFPNSSRFKNQHQESELVSLKIDDQH 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12667495 12670433 + Conep04aG0175900.1 Cone4ag1705 436683

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1705 319 PRINTS Putative plant GPCR, GCR1, signature 159 171 IPR022340 -
Cone4ag1705 319 PRINTS Putative plant GPCR, GCR1, signature 82 95 IPR022340 -
Cone4ag1705 319 PRINTS Putative plant GPCR, GCR1, signature 36 50 IPR022340 -
Cone4ag1705 319 PRINTS Putative plant GPCR, GCR1, signature 120 135 IPR022340 -
Cone4ag1705 319 PRINTS Putative plant GPCR, GCR1, signature 52 74 IPR022340 -
Cone4ag1705 319 PRINTS Putative plant GPCR, GCR1, signature 245 262 IPR022340 -
Cone4ag1705 319 PRINTS Putative plant GPCR, GCR1, signature 263 279 IPR022340 -
Cone4ag1705 319 PRINTS Putative plant GPCR, GCR1, signature 19 34 IPR022340 -
Cone4ag1705 319 PRINTS Putative plant GPCR, GCR1, signature 97 115 IPR022340 -
Cone4ag1705 319 PRINTS Putative plant GPCR, GCR1, signature 215 236 IPR022340 -
Cone4ag1705 319 PRINTS Putative plant GPCR, GCR1, signature 172 195 IPR022340 -
Cone4ag1705 319 PRINTS GCR1-cAMP receptor family signature 49 64 IPR022343 -
Cone4ag1705 319 PRINTS GCR1-cAMP receptor family signature 30 48 IPR022343 -
Cone4ag1705 319 PRINTS GCR1-cAMP receptor family signature 221 239 IPR022343 -
Cone4ag1705 319 PRINTS GCR1-cAMP receptor family signature 80 98 IPR022343 -
Cone4ag1705 319 PRINTS GCR1-cAMP receptor family signature 253 272 IPR022343 -
Cone4ag1705 319 PANTHER G PROTEIN-COUPLED RECEPTOR 157-RELATED 11 306 - GO:0004930(PANTHER)|GO:0005886(PANTHER)|GO:0007189(PANTHER)
Cone4ag1705 319 Gene3D - 10 299 - -
Cone4ag1705 319 Pfam Slime mold cyclic AMP receptor 24 273 - -
Cone4ag1705 319 ProSiteProfiles G-protein coupled receptors family 2 profile 2. 19 273 IPR017981 GO:0004888(InterPro)|GO:0007166(InterPro)|GO:0016020(InterPro)
Cone4ag1705 319 SUPERFAMILY Family A G protein-coupled receptor-like 16 291 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1705 K22987 - - mdm:103421099 569.311
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1705 Cone-Chr4:12667495 Cone7ag1621 Cone-Chr7:11011410 2.27E-137 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g174 Blo01g01438 . Bda01g00644 . . Bpe02g00515 . Bma01g02189 . . Cma01g01606 . Car09g00321 . . . Cpe06g00265 . . . . . . . Cla05g01637 Cam05g1746 Cec05g1756 Cco05g1812 Clacu05g1738 Cmu05g1623 Cre05g1750 Cone4ag1705 Cone7ag1621 . . Lsi04g01377 . . . . . . . . . . . Sed13g1922 Cmo01g01688 Cmo09g00373 Cma09g00372 . Car01g01310 . . Cpe02g00297 Bhi09g03068 Tan01g3494 Cmetu07g1418 . . . . . . . . . . . . . . Cme07g00168
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004383 1 3 1 1 1 1 3 1 1 1 1 1 1 1 1 2 1 2 2 1 1 1 1 0 1 1 1 2 6 1 42