Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1712 ATGGAAATAGATAAATTAAACCCGAAGCAGAAGGAAGAGCGGCAAGAAGCTCATCATCTCTCTGGTGCGTACATACGATGCTTAGTGAAACAATTGAGCTCTAGTTCCTCTTCTGCAACCAACAAAGAAGCCATGACTTTGCACAAAAACGAAGCATATTACTCTGTTCTTGATGGAGATGGAGAAATAGAGCATCAAACCCAGAAACCTAAACAGCAACAGCACAAGAAGCAGGTGAGGAGAAGGCTCCATACGAGCAGGCATTATCAAGAAAGGCTTCTAAACATGGCGGAAGCTAGAAGGGAAATTATTACTGCGCTTAAATTTCACAGAGCAGCCATGAAACAAGCAAATGAACAGAAACCGTGTGAAGATCAGAAGCAGCTACAGAAACAACAACAAGAAGACCCCTGTTGTGAACAAGATGGCAGGATTAAATCCAGAAGGAATCCCATAATTTACCCTTCTTCTAGCTCGCAGAATTATCCAAATTCATCTCCTCCTCCTTCTACCAGTTCAAATTCTCTACTTTCTCCTCTATATGTCGGTGATAAGAATATGAACAATTTAAATCTACCTACACACCCTCTGGGTCTGAATCTCAATTTTCAGAATTTCAACAATTTAGACACAACCACTCTGTTTCAAAGCAACAACCACAATTCCCCTTCATCCCCATCTTCAACTTCTAACGATTCACCCAATTCTATCCCTTTCTCTACTCTCGATCATCATCATCAGGAAATTCCTCCCAATTCAAATTATACATCATATGATGGCAGCGTTACACAGACTAATCTCTCTGGCTCTGCCACCTCCTCTGCCTCCGGTGGTGGTGGAGCAGGAAGAGAGTTACATGTCGCGGTGGACGAGGACGAAATGGCAGAGATAAGGTCTATGGGAGAGCAGCATCAGATGGAGTGGAGTGACACCATGAATTTGGTGAGTTCCGCTCGGTGGTTCAAGTTCTTGAAAGCTACGGAACCAGAACTGGTAGCTGAAGAAGGCAATGGGTTGCATACATTTAATGAAGTTATGGAATTTCCAGAATGGTTGAATCCAAATGAGACCACATTGCAGTCCCATTTCAATGATTACTGTTCCCATGATTATTTTCAAGATCCCGCCTCACCTCGAATGGAAATTGGAGAAATTGATGAAGGTATGGAAGGGGAGTGGTTAGCGTGA 1188 42.93 MEIDKLNPKQKEERQEAHHLSGAYIRCLVKQLSSSSSSATNKEAMTLHKNEAYYSVLDGDGEIEHQTQKPKQQQHKKQVRRRLHTSRHYQERLLNMAEARREIITALKFHRAAMKQANEQKPCEDQKQLQKQQQEDPCCEQDGRIKSRRNPIIYPSSSSQNYPNSSPPPSTSSNSLLSPLYVGDKNMNNLNLPTHPLGLNLNFQNFNNLDTTTLFQSNNHNSPSSPSSTSNDSPNSIPFSTLDHHHQEIPPNSNYTSYDGSVTQTNLSGSATSSASGGGGAGRELHVAVDEDEMAEIRSMGEQHQMEWSDTMNLVSSARWFKFLKATEPELVAEEGNGLHTFNEVMEFPEWLNPNETTLQSHFNDYCSHDYFQDPASPRMEIGEIDEGMEGEWLA 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12696556 12698166 - Conep04aG0176600.1 Cone4ag1712 436690

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1712 395 MobiDBLite consensus disorder prediction 214 277 - -
Cone4ag1712 395 MobiDBLite consensus disorder prediction 151 179 - -
Cone4ag1712 395 PANTHER E1A-BINDING PROTEIN P400-LIKE 16 395 - -
Cone4ag1712 395 MobiDBLite consensus disorder prediction 214 283 - -
Cone4ag1712 395 MobiDBLite consensus disorder prediction 65 84 - -
Cone4ag1712 395 MobiDBLite consensus disorder prediction 118 147 - -
Cone4ag1712 395 MobiDBLite consensus disorder prediction 118 179 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1712 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1712 Cone-Chr4:12696556 Cone7ag1630 Cone-Chr7:11033952 3.09E-177 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g188 . . . . Bpe02g01570 . . . . . . . . . . . . . . . . . . . . . . . . . . Cone4ag1712 Cone7ag1630 . . . . . . . . Bda01g01355 . Bpe14g00291 . . Bma02g00329 . . . . . . Car05g00884 . . . . . . . . . Cla08g00972 Cam08g1421 Cec08g1000 Cco08g1123 Clacu08g1125 . Cre08g0909 Lsi08g00820 . Chy03g00643 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007807 2 1 2 2 3 1 1 1 1 1 1 1 1 1 1 0 1 2 2 1 1 1 1 1 1 1 1 1 1 1 36