Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag1725 | ATGGGCTATCTGAATCCGGTATTGTCATGTTCAAGCCAGGTTCATGCTGCTGAGGACGTACCTGTAAGCGGCGGTGGCCTCAGTCAAAATGGGAAGTTCAGCTATGGATATGCTAGCTCTCCTGGGAAAAGGTCGTCAATGGAAGATTTCTACGAGACACGAATTGATGGCGTGGATGGCGAAATAGTTGGTCTCTTTGGGGTTTTTGATGGTCATGGGGGTGCACGGGCTGCTGAGTATGTCAAGCAAAACCTTTTCAGTAATCTGATCAGCCATCCAAAATTCATTTCTGATACCAAGTCAGCAATAGCTGATGCATACAACCACACAGACTCTGAATTTCTGAAATCGGAAAACAATCAAAACCGTGATGCGGGATCAACCGCTTCCACTGCCATCCTTGTTGGTGATCGTTTACTGGTTGCAAATGTTGGAGATTCAAGGGCTGTTATATGCCGAGGTGGCAATGCCATTGCTGTTTCTCGAGATCACAAGCCAGACCAAACTGATGAGCGACAAAGGATAGAGGAAGCAGGAGGATTTGTGATGTGGGCTGGTACGTGGAGAGTTGGAGGTGTTCTTGCTGTTTCACGTGCTTTTGGTGATAGGTTGTTGAAGCAGTATGTTGTTGCTGATCCAGAAATTCAGGAAGAAAAAGTTGACAGTTCTCTGGAGTTCCTTATACTTGCAAGTGATGGACTTTGGGATGTTGTCTCTAACGAGGAGGCCGTTTTGATGATCAAACCAATCCAAGATCCAGAAGAAGCTGCAAGGAGGCTTATGCAAGAAGCATATCAGAGAGGCAGTGCGGATAATATAACCTGTGTCGTGGTCCGTTTCTTGGCCAATCAAGGGGGTCCCTCACATGGCAGTTCTGGGTGA | 882 | 46.83 | MGYLNPVLSCSSQVHAAEDVPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGARAAEYVKQNLFSNLISHPKFISDTKSAIADAYNHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEEAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVLMIKPIQDPEEAARRLMQEAYQRGSADNITCVVVRFLANQGGPSHGSSG | 293 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 12767565 | 12771628 | - | Conep04aG0178000.1 | Cone4ag1725 | 436703 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag1725 | 293 | PANTHER | PROTEIN PHOSPHATASE | 34 | 279 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cone4ag1725 | 293 | FunFam | probable protein phosphatase 2C 59 | 26 | 284 | - | - | |
Cone4ag1725 | 293 | CDD | PP2Cc | 33 | 280 | IPR001932 | - | |
Cone4ag1725 | 293 | Pfam | Protein phosphatase 2C | 63 | 273 | IPR001932 | - | |
Cone4ag1725 | 293 | SMART | PP2C_SIG_2 | 45 | 280 | IPR001932 | - | |
Cone4ag1725 | 293 | SMART | PP2C_4 | 24 | 278 | IPR001932 | - | |
Cone4ag1725 | 293 | ProSitePatterns | PPM-type phosphatase domain signature. | 65 | 73 | IPR000222 | GO:0043169(InterPro) | |
Cone4ag1725 | 293 | ProSiteProfiles | PPM-type phosphatase domain profile. | 34 | 280 | IPR001932 | - | |
Cone4ag1725 | 293 | Gene3D | - | 26 | 284 | IPR036457 | - | |
Cone4ag1725 | 293 | SUPERFAMILY | PP2C-like | 28 | 280 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone14ag0002 | Cone-Chr14:28189 | Cone4ag1725 | Cone-Chr4:12767565 | 2.54E-31 | dispersed | |
Cone14ag0026 | Cone-Chr14:216001 | Cone4ag1725 | Cone-Chr4:12767565 | 3.62E-44 | dispersed | |
Cone15ag0028 | Cone-Chr15:207232 | Cone4ag1725 | Cone-Chr4:12767565 | 1.18E-117 | dispersed | |
Cone19ag0650 | Cone-Chr19:5557915 | Cone4ag1725 | Cone-Chr4:12767565 | 1.62E-47 | dispersed | |
Cone4ag0220 | Cone-Chr4:1013385 | Cone4ag1725 | Cone-Chr4:12767565 | 4.64E-20 | dispersed | |
Cone4ag1446 | Cone-Chr4:11479275 | Cone4ag1725 | Cone-Chr4:12767565 | 1.12E-125 | dispersed | |
Cone4ag1725 | Cone-Chr4:12767565 | Cone7ag1486 | Cone-Chr7:10425499 | 2.41E-125 | dispersed | |
Cone7ag0230 | Cone-Chr7:979564 | Cone4ag1725 | Cone-Chr4:12767565 | 5.99E-20 | dispersed | |
Cone4ag1725 | Cone-Chr4:12767565 | Cone7ag1645 | Cone-Chr7:11098796 | 3.35E-208 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag1725 | K17506 | - | gmx:100795017 | 553.132 |