Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag1741 | ATGGGTATATACCTTAGCACTCCGAAAACTGAAAAATTCTCTGAAGATGGAGGAAATGAAAGGCTTAGATATGGTCTGTCCTCCATGCAAGGTTGGCGTGCAACTATGGAAGATGCTCATGCTGCATATCCTGATCTGGATGCTTCAACTTCATTCTTTGGTGTTTTTGATGGTCATGGAGGTAAGGTGGTTGCCAAGTTCTGTGCGAAGTATCTTCACCAGCAAGTTCTGAAAAGTGAAGCATATGGTGCTGGGGATGTAGGAACTTCTGTTCAGAAAGCATTTTTCAGAATGGATGAAATGATGCGTGGGCAAAGGGGCTGGAGAGAATTAGCTATTTTGGGTGATAAAATAAACAAGTTTACTGGCATGATAGAAGGGTTGATCTGGTCTCCAAGAAGCAGTGATGGGAATGACCGAGTTGATGATTGGGCTTTTGAGGAGGGCCCACACTCTGGTTTTACGGGCCCAACTTCAGGGTGCACAGCTTGTGTTGCCATCCTTAGAAACAACGAACTTGTCGTTGCAAATGCCGGAGATTCTCGCTGTGTTTTATCAAGAAGGGGTCAGGCACACAATCTGTCTAGAGATCACAAACCTGATCTTGAGGCCGAAAAGGAAAGAATTCTGAAAGCTGGTGGTTTTATCCATGCCGGTCGAGTCAATGGTAGCTTGAACCTAGCTAGAGCTATTGGTGACATGGAATTCAAGCAGAATAAATTTTTGCCAGCTGAACGGCAAATTGTAACTGCCAATCCCGATGTTCTCAGTATCGAGCTTTCTGAGGATGATGAGTTTCTTGTGCTCGCATGCGATGGAATCTGGGACTGCCTGTCTAGTCAGCAACTGGTAGATTTTATATGA | 864 | 44.68 | MGIYLSTPKTEKFSEDGGNERLRYGLSSMQGWRATMEDAHAAYPDLDASTSFFGVFDGHGGKVVAKFCAKYLHQQVLKSEAYGAGDVGTSVQKAFFRMDEMMRGQRGWRELAILGDKINKFTGMIEGLIWSPRSSDGNDRVDDWAFEEGPHSGFTGPTSGCTACVAILRNNELVVANAGDSRCVLSRRGQAHNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAERQIVTANPDVLSIELSEDDEFLVLACDGIWDCLSSQQLVDFI | 287 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 12829972 | 12833727 | - | Conep04aG0179600.1 | Cone4ag1741 | 436719 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag1741 | 287 | SUPERFAMILY | PP2C-like | 3 | 287 | IPR036457 | - | |
Cone4ag1741 | 287 | CDD | PP2Cc | 23 | 287 | IPR001932 | - | |
Cone4ag1741 | 287 | Pfam | Protein phosphatase 2C | 157 | 287 | IPR001932 | - | |
Cone4ag1741 | 287 | Pfam | Protein phosphatase 2C | 23 | 104 | IPR001932 | - | |
Cone4ag1741 | 287 | ProSitePatterns | PPM-type phosphatase domain signature. | 52 | 60 | IPR000222 | GO:0043169(InterPro) | |
Cone4ag1741 | 287 | Gene3D | - | 1 | 287 | IPR036457 | - | |
Cone4ag1741 | 287 | PANTHER | PROTEIN PHOSPHATASE 2C | 21 | 287 | IPR015655 | GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER) | |
Cone4ag1741 | 287 | SMART | PP2C_4 | 13 | 287 | IPR001932 | - | |
Cone4ag1741 | 287 | ProSiteProfiles | PPM-type phosphatase domain profile. | 23 | 287 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag1741 | Cone-Chr4:12829972 | Cone7ag1942 | Cone-Chr7:12392172 | 9.06E-32 | dispersed | |
Cone20ag1132 | Cone-Chr20:7728195 | Cone4ag1741 | Cone-Chr4:12829972 | 4.58E-170 | wgd | |
Cone4ag1741 | Cone-Chr4:12829972 | Cone7ag1661 | Cone-Chr7:11158108 | 4.13E-208 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag1741 | K17499 | - | mdm:103442179 | 540.806 |