Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1759 ATGAAAGTTTATCTTCTCGTTCTTGCTGTGCTTCTCGTCCATCTTGATAAAAGACCCAGCGCCATTTGTGTCGCGTCGACACCAAGGTTCAAACATCTCGTTTTGTCGATATCAGCTCCGATTTCTTCACCATCTTTCTCACATATTTCTCCCATTCCCTCTGTTTCTTCCGCCGCCGCCGTTTCCGCCTCCAGAACCCAGACGGAAAGTGAAGAGCACAAAACGGATTCTCGTAAGAAATTAGTGATAGCAGTTGTTGTGGGAGTTTCAGTCTTTGCGTTCTTGCTGTTTTTGTTGTGCTTATGGATTTTTAATAGAAGCCGCCTCAAAAAATATCCGAAAGGAACTGCTAAGACCTCAGATGGTGAAAAAGGGCTTGCATTGGCTCCATTTTTGGGGAAATTAGATTCTCTCAAGACGTTTGGTAAAAGAGGATCTGTATCATTCATTGATTATAAGCTGATAGAGAAGGCGACGGAGAATTTTCTGGAGACTAATGTTTTAGGTGAGGGTGGATTTGGACGAGTTTACAAGGCTCACTTGGAAGATAATTTCTCTGTTGCTGTCAAGAAACTTGAATGCCCTTCTCATGATGCTGAGAGAGAATTTCAGAATGAAGTGGATTTGCTAAGCAAAATTCAGCATCCAAATGTCATATCCTTGTTGGGTTATAGTTCTCATGAAGATTCAAGGTTCATTGTTTACGAATTAATGGAAAATGGATCTCTGGAAACTAAAATACATGGTCCTTCTCATGGTTCCGAATTAACTTGGCAAATGCGGATGAAAATTGCTCTTGATGCAGCTAGAGGATTAGAGTATTTGCATGAGCACTCCAACCCTCCAGTGATCCATAGAGATCTGAAATCATCTAATATTCTTTTAGATGCCAACTTCAATGCCAAGCTGTCTGATTTTGGTCTTGCTGTCACTGGTGGGGTCCAAAGCAAGAGCAATATCAAGCTCTCAGGCACGTTGGGTTATGTAGCTCCAGAGTATATTTTAGATGGTAAATTGACTGATAAAAGTGATGTATATGCATTTGGGGTTGTGCTTCTAGAGCTTCTATTAGGGAGAAGGCCAGTAGAAAAACTGGCACCAGCTCAGTGCCAATCTATTGTCACATGGGCCATGCCTCAGCTTACAGACAGGTCAAAGCTACCTAACATTTTGGATCCTGTCATTAAAAATACAATGGATCTCAAACACTTGTACCAGGTTGCTGCCGTAGCTATACTATGTGTTCAACCAGAACCGAGTTATCGCCCGCTAATAACGGATATTTTGCATTCTCTTATCCCTCTTGTGCCTATTGAACTTGGAGGAACGTTGAAAAATCCACCTTCTCCCTGCTGA 1356 41.89 MKVYLLVLAVLLVHLDKRPSAICVASTPRFKHLVLSISAPISSPSFSHISPIPSVSSAAAVSASRTQTESEEHKTDSRKKLVIAVVVGVSVFAFLLFLLCLWIFNRSRLKKYPKGTAKTSDGEKGLALAPFLGKLDSLKTFGKRGSVSFIDYKLIEKATENFLETNVLGEGGFGRVYKAHLEDNFSVAVKKLECPSHDAEREFQNEVDLLSKIQHPNVISLLGYSSHEDSRFIVYELMENGSLETKIHGPSHGSELTWQMRMKIALDAARGLEYLHEHSNPPVIHRDLKSSNILLDANFNAKLSDFGLAVTGGVQSKSNIKLSGTLGYVAPEYILDGKLTDKSDVYAFGVVLLELLLGRRPVEKLAPAQCQSIVTWAMPQLTDRSKLPNILDPVIKNTMDLKHLYQVAAVAILCVQPEPSYRPLITDILHSLIPLVPIELGGTLKNPPSPC 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12913216 12916493 - Conep04aG0181600.1 Cone4ag1759 436737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1759 451 FunFam Protein kinase superfamily protein 129 237 - -
Cone4ag1759 451 ProSitePatterns Protein kinases ATP-binding region signature. 168 191 IPR017441 GO:0005524(InterPro)
Cone4ag1759 451 Gene3D Transferase(Phosphotransferase) domain 1 238 437 - -
Cone4ag1759 451 Gene3D Phosphorylase Kinase; domain 1 134 237 - -
Cone4ag1759 451 Pfam Protein tyrosine and serine/threonine kinase 166 400 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone4ag1759 451 FunFam probable receptor-like protein kinase At1g80640 238 437 - -
Cone4ag1759 451 PANTHER OS01G0750732 PROTEIN 29 435 IPR050885 -
Cone4ag1759 451 SMART serkin_6 162 433 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone4ag1759 451 SUPERFAMILY Protein kinase-like (PK-like) 143 432 IPR011009 -
Cone4ag1759 451 ProSiteProfiles Protein kinase domain profile. 162 433 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone4ag1759 451 CDD STKc_IRAK 168 435 - -
Cone4ag1759 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 283 295 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1000 Cone-Chr11:7992558 Cone4ag1759 Cone-Chr4:12913216 1.63E-151 dispersed
Cone4ag1759 Cone-Chr4:12913216 Cone15ag1154 Cone-Chr15:9341508 1.31E-91 dispersed
Cone17ag0996 Cone-Chr17:7667225 Cone4ag1759 Cone-Chr4:12913216 3.90E-138 wgd
Cone4ag1759 Cone-Chr4:12913216 Cone7ag1677 Cone-Chr7:11238636 2.02E-257 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82804 PF00400 WD40 8.70E-07 CL0186 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1759 - - - 0.0