Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1856 ATGAAATACCAAATTCTCTTCTCTCTTTCTTTCATTTCCATCTTCCTCTTCACCTCAACTTGTTCTCAACTACATGTCAACTATTACCACAAAACATGCCCCAATGTGAATGGAATTGTCCGGGCTGCAGTTCGTCTAAAGCTCCGCCAGACATTTACGACCGCCCCGGCCACTCTCCGGCTATTCTTCCACGATTGCTTTGTTCGGGGATGCGACGCTTCACTGTTGCTAACTTACAGAAACAACTCAGCAGAGCATGATAATCCCGACAACCTTTCTCTAGCAGGAGATGGGTTTGATACTGTGATCAAAGCCAAGGCTGCTCTTGATGCTGTTCCTTCTTGTAGAAACAAAGTCTCTTGTGCTGATATCTTAGCCTTGGCCACTAGAGATGTTGTCGCATTGACAGGAGGGCCGTATTATGAAGTGGAGTTGGGAAGAAGGGATGGAACGATCTCATCAAAAAAAAGTGTCAGACATCATCTTCCTCATCCTGACTTCAAGTTAGACCAGCTCAGATCAATGTTTGCTTCACATGGTCTCTCTCTAACAGATTTGATTGCCCTTTCAGGGGCACATACAATTGGTTTCTCACACTGCAACAAATTCACTAAACGCATATACAGCTTCAGCAAAAAGAATAGAATTGATCCAGCTCTAAATCTTGTGTATGCAAAAAGACTAGAAGAGATGTGTCCGAAAAATGTAGACCCGAGAATGGCGATCGAGATGGATCCGAACACGCCTCAAAAGTTTGATAACATGTATTACAAGAACTTGCAGCAAGGCAAAGGTCTGTTCACCTCGGATCAAGAATTGCTTACGGATATAAGATCAAGGAAAATTGTGAACCTGTTTGCTTTGCAGAAATCTACTTTTGAACGGGCTTTTGTAGCTGCTATGACTAGACTTGGACGAGTTGGGGTTAAAACCGGTAACCAAGGGCAGATTAGACACGATTGCAGCTTTGTAAATTAG 978 43.25 MKYQILFSLSFISIFLFTSTCSQLHVNYYHKTCPNVNGIVRAAVRLKLRQTFTTAPATLRLFFHDCFVRGCDASLLLTYRNNSAEHDNPDNLSLAGDGFDTVIKAKAALDAVPSCRNKVSCADILALATRDVVALTGGPYYEVELGRRDGTISSKKSVRHHLPHPDFKLDQLRSMFASHGLSLTDLIALSGAHTIGFSHCNKFTKRIYSFSKKNRIDPALNLVYAKRLEEMCPKNVDPRMAIEMDPNTPQKFDNMYYKNLQQGKGLFTSDQELLTDIRSRKIVNLFALQKSTFERAFVAAMTRLGRVGVKTGNQGQIRHDCSFVN 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13321633 13323134 + Conep04aG0191500.1 Cone4ag1856 436834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1856 325 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone4ag1856 325 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone4ag1856 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone4ag1856 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone4ag1856 325 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone4ag1856 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone4ag1856 325 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone4ag1856 325 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone4ag1856 325 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone4ag1856 325 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone4ag1856 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone4ag1856 325 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone4ag1856 325 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone4ag1856 325 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone4ag1856 325 CDD secretory_peroxidase 23 324 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone4ag1856 325 Gene3D - 27 325 - -
Cone4ag1856 325 Pfam Peroxidase 40 287 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone4ag1856 325 FunFam Peroxidase 27 174 - -
Cone4ag1856 325 FunFam Peroxidase 163 304 - -
Cone4ag1856 325 PANTHER - 13 325 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone4ag1856 325 ProSiteProfiles Plant heme peroxidase family profile. 23 325 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone4ag1856 325 SUPERFAMILY Heme-dependent peroxidases 23 325 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone4ag1856 325 Gene3D Peroxidase, domain 2 163 304 - -
Cone4ag1856 325 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601(InterPro)
Cone4ag1856 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0126 Cone-Chr16:712587 Cone4ag1856 Cone-Chr4:13321633 1.95E-89 dispersed
Cone20ag0309 Cone-Chr20:1381179 Cone4ag1856 Cone-Chr4:13321633 1.07E-79 dispersed
Cone4ag1856 Cone-Chr4:13321633 Cone8ag0155 Cone-Chr8:800105 2.09E-143 dispersed
Cone18ag1290 Cone-Chr18:9028754 Cone4ag1856 Cone-Chr4:13321633 1.39E-152 transposed
Cone4ag1856 Cone-Chr4:13321633 Cone7ag1760 Cone-Chr7:11625059 9.94E-54 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1856 K00430 - mdm:103431339 492.656