Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1865 ATGGCTCCTAGATTGGATTTCGCCAGCTGGTGGAGTAAAGATAGTAGCCAAAAGGGAGGCGGAACAGTACCCGTTATAGTGAAAATGGAGAAACCCACTTTCTCAGTGGTGGAAATCGCCGGCGCCGACGCCGCATTCCGGCCGGTGGAAAAGAGCCGTGGCAAAAACGCCAAACAAGTTACGTGGGTTCTTCTTCTCAAGGCTCATAGAGCTGTCGGTTGCATAGCCTGGCTCATTTCCCTTCTCTGGTCTTTACTTGGAACCATTAAGAAAAGGTTGATCTACAGGCAAGGAGTTGCCATGGAGAGTGGCAAATTGGGCAGAGGGAAATTGCTTTTTGGGGTCATTAGAGTCTTTTTAATCGCTTCGTTAGCAATTCTGGGATTTGAAGTGGTTGCGTATTTTAAAGGGTGGCATTATCTTCACAACCCCTCCAATTTGCATATCATAAGTATACCTCAAGCTTCTGATTTTCAGGGACTGCTCCATACAATCTATGTTGCTTGGTTAACTTTTCGGGCTGATTACATTGCTTATGTGATTCAATCACTCTCTCGGTTTTGTGTTTCTCTGTTTCTTATTCAGTCCTTGGATCGTATGGTGCTTAGCTTAGGTTGCTTGTGGATAAAGTATAAGAAGATTAAGCCCAGGATAGATGAGGATCTTTTCAAGTTGAATGATATTGAGAAGAAAACAGGGTATGAGCATCCAATGGTTCTTGTTCAAATTCCTATGTGTAATGAGAGAGAGGTGTATGAGCAATCTATATCGGCCTGTTGCCAACTTGATTGGCCAAAGGATAATTTGCTAATTCAAGTTCTAGATGATTCCGATGATGAGAGCATCCAATGGTTAATTAAGTCGGAGGTTAACAAATGGAGCCAAAAGGGTGTTAACATAATCTATAGGCATCGTTTCGTAAGAACTGGTTACAAAGCCGGGAATCTCAAGTCCGCTATGAGCTGTGATTATGTCAAAGATTATGAGTTTGTTGCAATCTTTGATGCTGATTTTCAACCTAACCCAGATTTCCTTAAGCAAACTGTGCCTCATTTCAAGGACAGCCCGGATTTAGGATTGGTACAAGCTAGATGGGCTTTTGTGAATAAGGAGGAGAACTTGTTGACTCGGCTACAAAACATAAACCTGTGTTTCCACTTTGAGGTGGAACAACAGGTCAATGGAGTATTCCTTAATTTCTTCGGTTTTAATGGAACGGCCGGGGTTTGGAGAATCAAAGCTCTAGAGGAGTCGGGTGGGTGGCTCGAAAGGACAACTGTAGAGGATATGGACATAGCTGTTAGGGCCCACCTTAACGGCTGGAAATTCATCTATCTCAATGACGTTCAGGTCCTTTGTGAAGTACCAGAGTCATATGAAGCTTATAGAAAGCAGCAACATCGCTGGCATTCTGGCCCCATGCAACTTTTTCGGTTATGTCTGCCTGCTATTATAACTTCGAAGATATCGACATGGAAGAAAGCAAATTTGATACTACTATTCTTTCTATTAAGGAAACTAATTCTCCCATTCTATTCCTTCACACTGTTCTGCATAATTCTTCCTCTAACAATGTTTGTACCAGAAGCTGAGCTTCCCATTTGGGTAATTTGTTACATACCCGTTTTCATGTCATTTCTCAATATTCTCCCTGCTCCAAAATCCTTCCCTTTTATCGTCCCTTACCTCTTATTTGAAAACACCATGTCCGTAACCAAATTCAATGCTATGGTTTCCGGATTGTTCCAATTGGGTAGCTCTTATGAGTGGATTGTGACCAAAAAATCCGGCCGTTCTTCCGAATCTGATTTACTTGCTGCTGCTGAAAGAGATTCAAAGATAATGAACCAACCTCAGATTTATAGAGGTTCTTCTGAAAGCGAGCTTTCACAATTGAGCTGCTTGAAAGAACAGAAAGAAGTAGTAGCTAAACGTGCTAAGAAAGTTAACAAGATATACAAGAAGGAGCTTGCTCTGGCATTTCTTTTATTGACGGCTTCAGTTAGAAGTCTTCTAGCAGCGCAAGGGGTTCATTTTTACTTCTTGCTTTTCCAAGGGGTGACTTTTCTTCTTGTGGGTCTGGATCTAATTGGGGAGCAAATGAGCTAG 2109 42.06 MAPRLDFASWWSKDSSQKGGGTVPVIVKMEKPTFSVVEIAGADAAFRPVEKSRGKNAKQVTWVLLLKAHRAVGCIAWLISLLWSLLGTIKKRLIYRQGVAMESGKLGRGKLLFGVIRVFLIASLAILGFEVVAYFKGWHYLHNPSNLHIISIPQASDFQGLLHTIYVAWLTFRADYIAYVIQSLSRFCVSLFLIQSLDRMVLSLGCLWIKYKKIKPRIDEDLFKLNDIEKKTGYEHPMVLVQIPMCNEREVYEQSISACCQLDWPKDNLLIQVLDDSDDESIQWLIKSEVNKWSQKGVNIIYRHRFVRTGYKAGNLKSAMSCDYVKDYEFVAIFDADFQPNPDFLKQTVPHFKDSPDLGLVQARWAFVNKEENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIYLNDVQVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIITSKISTWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPIWVICYIPVFMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKSGRSSESDLLAAAERDSKIMNQPQIYRGSSESELSQLSCLKEQKEVVAKRAKKVNKIYKKELALAFLLLTASVRSLLAAQGVHFYFLLFQGVTFLLVGLDLIGEQMS 702
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13366518 13370245 - Conep04aG0192400.1 Cone4ag1865 436843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1865 702 SUPERFAMILY Nucleotide-diphospho-sugar transferases 239 539 IPR029044 -
Cone4ag1865 702 Pfam Glycosyl transferase family group 2 331 540 IPR001173 -
Cone4ag1865 702 FunFam probable xyloglucan glycosyltransferase 5 230 455 - -
Cone4ag1865 702 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 229 456 IPR029044 -
Cone4ag1865 702 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 162 701 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0905 Cone-Chr16:9361254 Cone4ag1865 Cone-Chr4:13366518 0 dispersed
Cone17ag0903 Cone-Chr17:7115534 Cone4ag1865 Cone-Chr4:13366518 0.00E+00 dispersed
Cone20ag0246 Cone-Chr20:1089883 Cone4ag1865 Cone-Chr4:13366518 1.64E-287 dispersed
Cone2ag0150 Cone-Chr2:782959 Cone4ag1865 Cone-Chr4:13366518 0 dispersed
Cone4ag1635 Cone-Chr4:12361036 Cone4ag1865 Cone-Chr4:13366518 1.78e-314 dispersed
Cone4ag1865 Cone-Chr4:13366518 Cone7ag1317 Cone-Chr7:9641464 6.36e-310 dispersed
Cone4ag1865 Cone-Chr4:13366518 Cone7ag1772 Cone-Chr7:11666227 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1865 - - - 0.0