Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1868 ATGGATTCAAAGAAGTCTAACAAGATCACAGAAATCGTTAGGCTTCAACGAATCCTTAAGAAGTGGAGAAAGCTTGCAAACTCTTCAAAAGCAAGCAGCAGCAGCAGCAGCAATGTCAATGGCAGCGGCAGTGGCAAGAGCATCAAGTTTCTGAAAAGAACACTCTCTCTATCAGATCGCTCTACCTCAGTGCGTGATGATTCAGGCTCAGGCGATGTGAATGTGCCAAAAGGGTATCTAGCCGTTAGTGTGGGAGAAGAGCTTAAGAGATTTGTCATCCCAACACAGCATTTGGGTCATCGTGCATTCGAGATTTTGTTGAGGGAAGCAGAAGAGGAATTTGGGTTCCAACAGGAAGGCGTTCTGAGATTTCCATGTGATGTTCCTGTTTTTGAAAGTGTATTGAAAATGGTTGAGCAGAAGAAGGATATCTCTTTTATACTGCAGAAATGTAGTTTCAGTGCAGATGATTTGGTGGGTTACTGTCCATCAGATCAAACCCAGCTTCCTGCTCATAATTCTCACCATAATCCACACAGTCCAATGTGCAGATAG 555 43.6 MDSKKSNKITEIVRLQRILKKWRKLANSSKASSSSSSNVNGSGSGKSIKFLKRTLSLSDRSTSVRDDSGSGDVNVPKGYLAVSVGEELKRFVIPTQHLGHRAFEILLREAEEEFGFQQEGVLRFPCDVPVFESVLKMVEQKKDISFILQKCSFSADDLVGYCPSDQTQLPAHNSHHNPHSPMCR 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13387584 13388138 - Conep04aG0192700.1 Cone4ag1868 436846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1868 184 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 15 138 IPR003676 GO:0009733(InterPro)
Cone4ag1868 184 Pfam Auxin responsive protein 15 138 IPR003676 GO:0009733(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1868 Cone-Chr4:13387584 Cone7ag0002 Cone-Chr7:20878 5.32E-19 dispersed
Cone20ag1399 Cone-Chr20:8924205 Cone4ag1868 Cone-Chr4:13387584 1.25E-17 transposed
Cone4ag1868 Cone-Chr4:13387584 Cone7ag1781 Cone-Chr7:11707117 1.68E-112 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1868 K14488 - cit:102619609 198.749