Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone4ag1872 | ATGGCTTTCTTCTTCTTCTTCTTCTTCGGCATATCACTTGTAGCTCTAGTACTACTCTCTATCCTTTCTTATTATTTCCTAATAAGGGTTGGTACTATTGCTACTAAGAGTTGCAAAACAGCTCCAGAAGCTTCTGGAGGATGGCCTATACTAGGCCACCTGCCCTTACTCGGACGGTCTCAGACTCCCCGTGCAGTTTTAGGTGCCATGGCAGACGAATACGGCCCAATATTCACCATAAGATTGGGCCTCATGAGCACTGTAGTGGTCAGCAGTTGGGAGATGGCGAAAGAATGCTTCTCCACAAACGATCTGGCTGTTTCCTCACGTCCAAGACTTGTGGGCATGAAGCACATGGGTTATAACCACGCCTTTTTTGGGTTTGCTGAGTACGGGCCATTTTGGCGCGAGATGCGGAAACTCGTTACCTTACAGCTACTCTCCAACCACCGGGTGGATCGACTTAAAGATTCAAGAATCTATGAAGTTAGAACCTCGGTAAGAAGACTATATAAACTTTGGACTGCTGAAAAAGAGGGTTTAGACGGCCGGATTTTAATTCATTTGGATAAGTGGTTTGGAGAGGTGGCTTATAACGTGATTATTAAAGCGGTCGCTGGGGAGAGGTACTTCTGTGCCACCACGGCGGAGGAGGAAGGAAAAGCAAGGCGGAGACAGAAGGCGCTGAATGATTTCATGCACTTAATGGGGAAGTTTGTCGTGTCGGATTGTATACCTTTTCTTGGGTGGTTGGATATAGGCGGTTATGAGAAGGAAATGAAGAAAATTGCAAAAGAATTGGATCAGATTCTTGAGGAATGGTTGGAAGAGCATAAGCGAAAGAGAGATTCAGGTGAGGCGAAAGGTGATGAGGACTTCATCTACGTTATGCTCTCTACACTTGACGGCCAAAACGTCGCCGGTTTCGATGCCGATACAGTTATCAAAGCTACTTGTTTGGCTATGATATTAGGAGGCAGTGATACAAGCACAGTGACATTAACATGGGCGATGTCTTTATTGCTAAACAATCCCGAAACGCTGAAAATGGCACAAGAAGAGCTTGATGTTCAAGTTGGCAGGGGAAGACTAGTAGACGAGTCAGACATTGGCACGTTGGTCTATATACAAGCAATCATTAAAGAGACTTTTCGTTTATATCCACCTGCACCATTATCAGGTCCACGTGTAGTTACTGAGGATTGTTCTATAGGAGGATACCACGTCCGCAAAGGTACCCGACTGATAACTAATCTGTGGAAGATCCAAACCGACCCACGAATATGGGAGGACCCGTTGGATTTCAAACCCGAGAGGTTTTTGACCAGCTGCAAGGATATTGACGTAAGGGGTAAACATTACGGGTTGATACCATTTGGAAGCGGTAGAAGGATTTGCCCTGGGATATCGTTCTCTCTTCAGGCAGTGAGCTTGACTCTAGCTTTGTTTCTTCAAGCGTTTGACGTAATGAATCCGTCAAATGACCCGATCGACATGTCGGAGAATTTTGGTTTAACAAATGCTAAAGCTACTCCTCTTCAAGTTGTCATTACACCACGCTTATCTTCTCATCTATATGATTAA | 1584 | 45.01 | MAFFFFFFFGISLVALVLLSILSYYFLIRVGTIATKSCKTAPEASGGWPILGHLPLLGRSQTPRAVLGAMADEYGPIFTIRLGLMSTVVVSSWEMAKECFSTNDLAVSSRPRLVGMKHMGYNHAFFGFAEYGPFWREMRKLVTLQLLSNHRVDRLKDSRIYEVRTSVRRLYKLWTAEKEGLDGRILIHLDKWFGEVAYNVIIKAVAGERYFCATTAEEEGKARRRQKALNDFMHLMGKFVVSDCIPFLGWLDIGGYEKEMKKIAKELDQILEEWLEEHKRKRDSGEAKGDEDFIYVMLSTLDGQNVAGFDADTVIKATCLAMILGGSDTSTVTLTWAMSLLLNNPETLKMAQEELDVQVGRGRLVDESDIGTLVYIQAIIKETFRLYPPAPLSGPRVVTEDCSIGGYHVRKGTRLITNLWKIQTDPRIWEDPLDFKPERFLTSCKDIDVRGKHYGLIPFGSGRRICPGISFSLQAVSLTLALFLQAFDVMNPSNDPIDMSENFGLTNAKATPLQVVITPRLSSHLYD | 527 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 13411588 | 13413468 | - | Conep04aG0193100.1 | Cone4ag1872 | 436850 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone4ag1872 | 527 | Coils | Coil | 253 | 284 | - | - | |
| Cone4ag1872 | 527 | PRINTS | P450 superfamily signature | 325 | 342 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1872 | 527 | PRINTS | P450 superfamily signature | 457 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1872 | 527 | PRINTS | P450 superfamily signature | 378 | 389 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1872 | 527 | FunFam | Cytochrome P450 82C4 | 32 | 518 | - | - | |
| Cone4ag1872 | 527 | CDD | CYP82 | 75 | 520 | - | - | |
| Cone4ag1872 | 527 | SUPERFAMILY | Cytochrome P450 | 47 | 520 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1872 | 527 | PRINTS | E-class P450 group I signature | 95 | 116 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1872 | 527 | PRINTS | E-class P450 group I signature | 71 | 90 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1872 | 527 | PRINTS | E-class P450 group I signature | 377 | 395 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1872 | 527 | PRINTS | E-class P450 group I signature | 196 | 214 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1872 | 527 | PRINTS | E-class P450 group I signature | 334 | 360 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1872 | 527 | PRINTS | E-class P450 group I signature | 314 | 331 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1872 | 527 | PRINTS | E-class P450 group I signature | 418 | 442 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1872 | 527 | PRINTS | E-class P450 group I signature | 466 | 489 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1872 | 527 | PRINTS | E-class P450 group I signature | 456 | 466 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1872 | 527 | PANTHER | CYTOCHROME P450 82C3-RELATED | 22 | 523 | IPR050651 | - | |
| Cone4ag1872 | 527 | Pfam | Cytochrome P450 | 46 | 506 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1872 | 527 | Gene3D | Cytochrome P450 | 33 | 525 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone4ag1872 | 527 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 459 | 468 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone4ag1872 | Cone-Chr4:13411588 | Cone4ag1876 | Cone-Chr4:13422523 | 0 | dispersed | |
| Cone4ag1874 | Cone-Chr4:13416786 | Cone4ag1872 | Cone-Chr4:13411588 | 1.67E-33 | dispersed | |
| Cone4ag1875 | Cone-Chr4:13417599 | Cone4ag1872 | Cone-Chr4:13411588 | 1.06E-40 | dispersed | |
| Cone4ag1872 | Cone-Chr4:13411588 | Cone4ag1873 | Cone-Chr4:13416510 | 3.45E-42 | tandem | |
| Cone20ag0736 | Cone-Chr20:5045765 | Cone4ag1872 | Cone-Chr4:13411588 | 7.14E-151 | transposed | |
| Cone6ag1368 | Cone-Chr6:10967695 | Cone4ag1872 | Cone-Chr4:13411588 | 2.65E-33 | transposed | |
| Cone20ag0162 | Cone-Chr20:705668 | Cone4ag1872 | Cone-Chr4:13411588 | 8.43E-48 | wgd | |
| Cone4ag1872 | Cone-Chr4:13411588 | Cone6ag1596 | Cone-Chr6:12388422 | 2.12E-90 | wgd | |
| Cone4ag1872 | Cone-Chr4:13411588 | Cone7ag1785 | Cone-Chr7:11722440 | 7.54E-40 | wgd | |
| Cone4ag1872 | Cone-Chr4:13411588 | Cone9ag1518 | Cone-Chr9:11088097 | 8.10E-09 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone4ag1872 | - | - | - | 0.0 |