Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag1880 | ATGGCGGTAACATATCTAGCTTTTCCTTCTATTCTACCGCCAACAAGCGGATCGTGTACTACTAAAACGTTCACGCACAATAGTAATAATGTCCGTCTGATCTTGGCTTCTTCGCCACATGTGGAAGAACCCACAGAACTACCCATCAGAAAAATCCCAGGCAACTATGGCCTCCCTTTCATAGGTCCCATCAAAGATCGGCTCGATTTCTTCTACAACCAAGGCAAAGACGAGTACTTCAAATCACGCATCCAAAAGTACCAATCAACAGTGTTCAGAGCAAACATGCCTCCGGGCCCATTCATTTCGCCCAATCGCAACGTCGTCATTTTGCTCGACGGCAAGAGCTTCCCCGTACTCTTCGACGTCACCAAGGTCGAAAAGAAGGACCTTTTCACCGGAACTTTCATGCCGTCAACAGACTTCACCGGCGGTTACCGTGTCCTCTCTTACCTTGACCCATCCGAACCGAAACACGGGAAGTTAAAACGACTCATGTTCTTCCACCTCAAGGCTCGTCGCGACGAGGTGATCCCTCAATTCCATTTCAGCTATACCGAGCTCTTTGAATCGCTCGAAAACGACGTCTCATCGGAAGGTAAAGCTAATTTCGGAGAAGCCAACGATCGCGCTGCGTTCAACTTCTTGGCTCGGTCTCTCTATGGAGTTGACCCGGCGGTGACCAAACTCGGTCTCGAAGGTCCGGGTTTGATCGGCAAATGGGTGCTCTTCCAGCTCAGCCCGCTTCTGACACTAGGCCTTCCGAAGATTCTAGAAGATCTTCTCATCCACACTTTCCCTCTTCCTTCATTCCTCGTCAAATCCGACTACAATCGCCTTTACGATTTCTTCTACGAGTCGCCTGGTTTTTTACTAGAGGAAGGGGAGAGACTCGGCCTATCGAAAGAGGAAACGTGTCACAACCTCCTGTTCGCCACGTGTTTCAATTCATTCGGAGGTATGAAGATCTTCTTCCCCAATCTACTAAAATGGATCGGACGAGCAGGAGTCAAGATCCACACCCAGCTAGCCGAAGAGATCCGATCCGCCGTCAGATCCAACGGTGGAAAAATCACGATGGCTGCCATCGAACAGCTTCCATTAACGAAATCCGTCGTGTACGAGTCTTTACGTATCGAACCACCGGTTCCGTTGCAGTACGGGAAAGCAAAGCGCGATCTTCTGATCGAGAGCCACGACGCAGCGTTTAAGGTGAAAAAAGGGGAGTTGATATTCGGTTACCAACCGTTTGCTACGAAGGATCCGAAAATATTCGAAAGATCAGAAGAGTTTGTAGCGGATCGGTTCGTGGGGGAGGAAGGGGAGAAGTTGCTCAAGCACGTGCTGTGGTCAAACGGACCAGAGTCAGAGAATCCGACGGTGGGGAATAAACAGTGTGCAGGGAAAGATTTCGTAGTGTTAGTCTCGAGGCTTTTGGTGATAGAGTTGTTTTTGCGGTATGATTCGATTGAGATTGAAGTCGGAACGTCGCCGTTAGGGGCGGCCGTTACTGTAACTTCACTGAAGAAATCGAGTTTTTGA | 1542 | 49.29 | MAVTYLAFPSILPPTSGSCTTKTFTHNSNNVRLILASSPHVEEPTELPIRKIPGNYGLPFIGPIKDRLDFFYNQGKDEYFKSRIQKYQSTVFRANMPPGPFISPNRNVVILLDGKSFPVLFDVTKVEKKDLFTGTFMPSTDFTGGYRVLSYLDPSEPKHGKLKRLMFFHLKARRDEVIPQFHFSYTELFESLENDVSSEGKANFGEANDRAAFNFLARSLYGVDPAVTKLGLEGPGLIGKWVLFQLSPLLTLGLPKILEDLLIHTFPLPSFLVKSDYNRLYDFFYESPGFLLEEGERLGLSKEETCHNLLFATCFNSFGGMKIFFPNLLKWIGRAGVKIHTQLAEEIRSAVRSNGGKITMAAIEQLPLTKSVVYESLRIEPPVPLQYGKAKRDLLIESHDAAFKVKKGELIFGYQPFATKDPKIFERSEEFVADRFVGEEGEKLLKHVLWSNGPESENPTVGNKQCAGKDFVVLVSRLLVIELFLRYDSIEIEVGTSPLGAAVTVTSLKKSSF | 513 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 13437908 | 13439661 | - | Conep04aG0193900.1 | Cone4ag1880 | 436858 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag1880 | 513 | Gene3D | Cytochrome P450 | 47 | 513 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone4ag1880 | 513 | CDD | CYP74 | 81 | 506 | - | - | |
Cone4ag1880 | 513 | FunFam | Allene oxide synthase, chloroplastic | 47 | 513 | - | - | |
Cone4ag1880 | 513 | PANTHER | CYTOCHROME P450 26 | 51 | 487 | - | GO:0009535(PANTHER)|GO:0009695(PANTHER)|GO:0009941(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
Cone4ag1880 | 513 | Pfam | Cytochrome P450 | 339 | 486 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone4ag1880 | 513 | PRINTS | E-class P450 group IV signature | 366 | 382 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone4ag1880 | 513 | PRINTS | E-class P450 group IV signature | 419 | 437 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone4ag1880 | 513 | PRINTS | E-class P450 group IV signature | 466 | 484 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone4ag1880 | 513 | SUPERFAMILY | Cytochrome P450 | 48 | 495 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag1126 | Cone-Chr12:9073403 | Cone4ag1880 | Cone-Chr4:13437908 | 6.77E-182 | wgd | |
Cone17ag1313 | Cone-Chr17:9317475 | Cone4ag1880 | Cone-Chr4:13437908 | 1.30E-292 | wgd | |
Cone20ag0160 | Cone-Chr20:698999 | Cone4ag1880 | Cone-Chr4:13437908 | 3.77E-295 | wgd | |
Cone4ag1880 | Cone-Chr4:13437908 | Cone7ag1789 | Cone-Chr7:11734720 | 0 | wgd | |
Cone4ag1880 | Cone-Chr4:13437908 | Cone8ag1170 | Cone-Chr8:10108017 | 8.98E-194 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag1880 | K01723 | - | sly:606711 | 756.903 |