Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag1892 | ATGACGTCGGAAGGAGTAATGTCGGCGTCGGCGAGTAGGAGGAAGCCGTCGTGGAGAGAGAGGGAGAACAACAGGAGGAGGGAAAGGAGAAGGAGAGCTATAGCGGCGAAGATATATGCAGGGCTTAGAGCTCAGGGGAACTATAATTTGCCTAAGCACTGTGATAACAACGAAGTGCTTAAAGCTCTCTGTGTTGAAGCTGGTTGGACTGTCGAAGATGACGGCACTACCTATCGCAAGGGATGCAAGCTACCCCCAAGTGACATTGCGGGAACATCCACTAAAATCACTCCATTTTCCTCCCTGAATCCGAGTCCATTATCTTCGTTATTTCCAAGCCCAATTCCTTCCTATCAAGTCAGTCCCTCCTCCTCCTCCTTCCCAAGTCCATCTCGTTTCGATGCCAGCAACCCTTCTAATCTCATCCCCTATCTTCGCCAAGCCATTCCAACCTCTCTTCCGCCTTTACGCATATCTAACAGTGCTCCTGTAACTCCTCCCGTCTCTTCCCCAACATCAAAGAATCCCAAGCCTATACCCAGTTGGGAAGCTATTGCTAAAGAATCCATGCTATCATTAAACTACCCTTACTTTGCTGTATCTGCTCCAGCTAGCCCAACCCGTCACCGGATTCATACTCCGGCCACTATCCCTGAATGTGACGAGTCTGATTCGTCCACGGTCGATTCTGGCCATTGGGTAAATTTCCAGTCATATGCACACTATACGTCTGTAATGCCCCCATCTCCAACTTTTAACCTCGTGAAACCTGTGGCTCAGCCTAACTTGGGGAATAATGCAATCAATGAAAGAAAAAGGGCCAATGAGTCTGTGTTCGAAGGTAATAAGGTGAAGCCATGGCAAGGGGAGAGAATTCATGAGGTTAGATTGGATGATTTGGAGCTCACTCTTGGAAGTGGTAGGACTCAGAGTTAG | 936 | 48.4 | MTSEGVMSASASRRKPSWRERENNRRRERRRRAIAAKIYAGLRAQGNYNLPKHCDNNEVLKALCVEAGWTVEDDGTTYRKGCKLPPSDIAGTSTKITPFSSLNPSPLSSLFPSPIPSYQVSPSSSSFPSPSRFDASNPSNLIPYLRQAIPTSLPPLRISNSAPVTPPVSSPTSKNPKPIPSWEAIAKESMLSLNYPYFAVSAPASPTRHRIHTPATIPECDESDSSTVDSGHWVNFQSYAHYTSVMPPSPTFNLVKPVAQPNLGNNAINERKRANESVFEGNKVKPWQGERIHEVRLDDLELTLGSGRTQS | 311 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 13494607 | 13496551 | + | Conep04aG0195300.1 | Cone4ag1892 | 436870 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag1892 | 311 | MobiDBLite | consensus disorder prediction | 14 | 29 | - | - | |
Cone4ag1892 | 311 | MobiDBLite | consensus disorder prediction | 160 | 179 | - | - | |
Cone4ag1892 | 311 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 12 | 310 | IPR033264 | GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro) | |
Cone4ag1892 | 311 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Cone4ag1892 | 311 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 12 | 136 | IPR008540 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag0761 | Cone-Chr12:7015882 | Cone4ag1892 | Cone-Chr4:13494607 | 9.33E-95 | dispersed | |
Cone4ag1892 | Cone-Chr4:13494607 | Cone8ag0795 | Cone-Chr8:7987106 | 1.45E-90 | dispersed | |
Cone4ag1892 | Cone-Chr4:13494607 | Cone7ag1804 | Cone-Chr7:11802434 | 7.72E-160 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46062 | PF00651 | BTB | 3.20E-19 | CL0033 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag1892 | K14503 | - | csv:101219853 | 392.119 |