Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1945 ATGGCGGAAACAGGGTCAGGGATGGGAGGGAGAATGTGGTGCTCGGTGCCGGAGAAGATGCAGCTTCATGGAGCCATGTTGGCCTTGCAGTTTGGCTATGCAGGCTTCCACGTTGTTTCCAGATTTGCCCTCAACATGGGCATTAGTAAACTTGTTTTCCCTGTTTACAGGAACATCATTGCCTTGATCCTGCTCCTTCCCTTTGCATATTTCCTGGAGAAGAAGGAGAGGCCTGCCATTACACTGAATTTTCTCCTTCAGTTCTTCCTCCTTGCTCTCGTTGGAATAACAGCGAACCAAGGATTTTACTTGCTGGGTTTGGACAACACGTCACCCACCTTTGCGTCGGCGATACAAAACTCTGTTCCGGCCATTACTTTCCTCATGGCTGCCTTACTCCGGATAGAACATGTCCGAATTAACAGAAAAGACGGAATAGCAAAAGTGGTAGGAACAATCTGCTGCGTCGCAGGAGCCACAGTGATCACACTCTACAAGGGACCCACCATATACAGCCCAACTCTGTCGCTACAAATCACCTTGGCCGGAACCACACCAGAGGCACCGTACACGTACTTGGGCGACGCAAAGGGAAAAAGTTGGACTCTGGGTTGCGTGTATCTAATCGGACATTGCCTGTCCTGGTCCGGTTGGCTCGTCTTACAAGCTCCGGTTCTGAAAAAGTATCCGGCCCGGCTCTCCGTCACTTCCTACACGTGTTTCTTCGGGATTTTGCAGTTTCTGATTATCGCTGCGTTTGCAGAGAGAGACCCTCAAGCTTGGCTTTTTCACTCCGGGGGTGAAATCTTCAGCGTCTTATACGCTGGTGTAGTGGCGTCTGGAATAGCGTTTGCAGTTCAGATATGGTGTATTGACAGAGGGGGCCCTGTTTTTGTGGCGGTTTACCAGCCTGTTCAGACTCTTGTTGTCGCTATTATGGCTTCTATTGCTTTAGGCGAGGAGTTCTACTTGGGCGGGATAATAGGGGCGGTGCTGATCATAACAGGATTGTACTTTGTGCTTTGGGGAAAGAGTGAAGAAAGGAAATTGAACTCTCAGGAGAAGGCAGCGATTCAGTACGCTACGGAACACGATAACAGAACAAGCAGCCGCGTGGCCCACGCCAAGTCCTCTATTACCCAACCACTTCTCCCTTCGTCAACCGAAAACGTTTGA 1176 50.09 MAETGSGMGGRMWCSVPEKMQLHGAMLALQFGYAGFHVVSRFALNMGISKLVFPVYRNIIALILLLPFAYFLEKKERPAITLNFLLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAALLRIEHVRINRKDGIAKVVGTICCVAGATVITLYKGPTIYSPTLSLQITLAGTTPEAPYTYLGDAKGKSWTLGCVYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGILQFLIIAAFAERDPQAWLFHSGGEIFSVLYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAVLIITGLYFVLWGKSEERKLNSQEKAAIQYATEHDNRTSSRVAHAKSSITQPLLPSSTENV 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13711758 13713843 - Conep04aG0200700.1 Cone4ag1945 436923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1945 391 PANTHER WAT1-RELATED PROTEIN 25 356 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cone4ag1945 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Cone4ag1945 391 MobiDBLite consensus disorder prediction 367 391 - -
Cone4ag1945 391 Pfam EamA-like transporter family 29 163 IPR000620 GO:0016020(InterPro)
Cone4ag1945 391 Pfam EamA-like transporter family 203 341 IPR000620 GO:0016020(InterPro)
Cone4ag1945 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 346 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1945 Cone-Chr4:13711758 Cone9ag0339 Cone-Chr9:1479254 5.96E-74 dispersed
Cone17ag1370 Cone-Chr17:9540516 Cone4ag1945 Cone-Chr4:13711758 5.56E-48 wgd
Cone20ag0110 Cone-Chr20:496952 Cone4ag1945 Cone-Chr4:13711758 1.34E-193 wgd
Cone4ag1945 Cone-Chr4:13711758 Cone7ag1859 Cone-Chr7:12018231 3.17E-260 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1945 - - - 0.0